Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1998 atGATTGCCTTTTCCAGCATACTGGTGCACGAAAAGTGTGAAAGCTACTTAATTTTTAGCAGAGAAACTGTCCTTGGGGATAATTTTCGGGCATTTTTGTATTTCCTTGGCCTTGCTTATTGCTTTATCGGATTATCGGCTATAACTGCTCGCTTCTTTCAATCGATGGAAAATGTGGTCAAGCACTCAAGGAAGATAGTGGAGGCAGATCCTGTTACTAAAACTGAAACTATTAGATATGAAAAAGTTTGGAATTACACTATTGCGGATATTAGCCTGTTGGCCTTTGGAACTAGCTTTCCTCAGATATCATTAGCCACCATTGATGCTGTACAAAACATAGGGAAGCTGTATGCTGGAGGTTTGGGACCCGGAACACTTGTTGGTTCTGCAGCATTTGACCTTTTCCCCATCCACGCTGTTTGTGTAGTAGTTCCAAAAGCAGGAGAGCTGAAGAAGATTGCTGATCTAGGAGTATGGCTGGTGGAGCTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATAATTTTGGAGATATGGACTCCAAATGTTGTGACTCTCTGGGAGGCCTTGTTGACAGCACTGCAATATGGATTACTATTGACTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTCTCCCTATTGCAAGAGATGAGAGGCCTGAGGAATGGGTGCCAGAAGAGACTCCCACAGATCCATCGTATCGCAGAGTACCTCAAATAGATGATGAAATTTTGGACAAGGCTAAGGAAACAATGTTGGAGGATACCCACTTGCTTACAATTTGGAGACAGCAATTTGTGGATGCACTGAGGTGGGAGAGcccaaaatcaaacaaattcaGAAATGTATATCTCCGCATAGCTCGTATTTTCTGGCAATTGCTGCTTTTACCATGGAGATTTCTGTTTGCTTTTGTTCCTCCATGCCAAATTGCTCATGGATGGATCTCCTTCATTTGCTCTCTGCTTTTCATCAGTGGGATAGCTTACATTGTGACTAAGCTCACAGATCTTATAAGCTGTGTCACAGGAATAAATGCTTACGTGATAGCATTCACAGCCCTAGCCAGTGGAACCTCGTGGCCTGATCTAGTGGCAAGCAAGATTGCTGCCGAACGTCAAAAAACTGCTGATTCTGCAATTGCAAACATCACTTGCAGTAATTCAGTGAATATATATGTTGGTATTGGTGTTCCATGGCTTATCGATACTTTGTACAACTTCATAGCATATAGAGAACCTCTCCGAATCCAAAATGCAGGGGGACTAAGCTTTTCGTTGATTGTTTTCTTCTCCACTTCTGTTGGGTGTATCTCAGTTTTGGTTTTTAGGCGTATAATTTTTGGTGCAGAGCTAGGAGGGCCTAGGCTCTGGGCATGGATTACCTGTGCGTTCTTCATGTTGTTGtggattatttttgttgtactATCTTCACTCAAGGTTTCCGGATTCATTTAG 1473 0.4148 MIAFSSILVHEKCESYLIFSRETVLGDNFRAFLYFLGLAYCFIGLSAITARFFQSMENVVKHSRKIVEADPVTKTETIRYEKVWNYTIADISLLAFGTSFPQISLATIDAVQNIGKLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEIWTPNVVTLWEALLTALQYGLLLTHAYAQDKRWPYISLPIARDERPEEWVPEETPTDPSYRRVPQIDDEILDKAKETMLEDTHLLTIWRQQFVDALRWESPKSNKFRNVYLRIARIFWQLLLLPWRFLFAFVPPCQIAHGWISFICSLLFISGIAYIVTKLTDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQNAGGLSFSLIVFFSTSVGCISVLVFRRIIFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1998 490 PANTHER SODIUM/CALCIUM EXCHANGER 267 490 - -
Ssu7g1998 490 PANTHER SODIUM/CALCIUM EXCHANGER 5 212 - -
Ssu7g1998 490 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 5 212 - -
Ssu7g1998 490 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016021|GO:0055085
Ssu7g1998 490 Pfam Sodium/calcium exchanger protein 319 482 IPR004837 GO:0016021|GO:0055085
Ssu7g1998 490 Gene3D - 280 484 IPR044880 -
Ssu7g1998 490 Gene3D - 86 225 IPR044880 -
Ssu7g1998 490 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 267 490 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1998 5 490 Antiporters AT2G47600 69.333 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1998 K03452 K05849 gmx:100792839 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1998 7 39690406 39696103 Ssu7g1998 7 39690406 39696103 ECH