Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1937 ATGTTACTTTTCCATTTGCAGTGGAACTCTTCAGGTGGTGGTGGAAGTGGAAGCCCCGTTCAGAGAGTTGTCTTTCATTTTGTTCAAGCCCTTCTAGaaagaatcaaaagagaaaCAGGAGGAAGGGTGACACTGAAAGGGTGTGAGAAAAACGAGGAAAGGGAATTGATTGAGAAGTTAACATCGGATACTAACATGGCTGTTATGTGCCATCAAAAAATTCCTTTCAATCAAGTAATGCAGTTTGCTGGGGCGCAAGCCATAGTGGAACATGTTGCATCCCAAACCAAAATCCATCTCATAAACCTTGATATTGGATGTGGGGCGCAATGCACAGCTTTGATGCAAGCACTGGCAGAGAGGCAGGAAAGACAAGTGGAGCTTCTGAAGATAACCGCCATTGGACTTCAAGGCAAGACAGAACTAGAAGAGACAGGGAAAAGGTTAGTGAGTTTTGCTAAATCCTTAAACTTGCCCTTCTTATATAAGGTAGTTTTTGTTACAAGCATCATAGAGATCAAGGTAGAGCAATTTGATATTGAACATAATGAAGCTGTAGCTGTCTATTCTCCTTATATGCTGAGGACTATGGTATCGGATTCTGATTCCTTGGAACACTTGATGCGGGTGATGAGAAAAATCAGACCAACTATAATGATAGTTCTTGAGTTGGAAGCAAACCATAACTCACCCTCCTTTGTGAATCGGTTCATTGAAGCATTGTTCTTCTACGCGGCATTTTTTGAATGCACTGAGACCTGCATGAAGCAGGATTATGAGTGCAGAATGAGAATCGAGGGAATATTGCCTGAAGGGATACGAAACATTGTTGCTACGGAAGATGGAGAAAGGACGGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCGAGGTATAGAATGGTGGAAATTGGATTTAGTGAGTCATCTTTGTACCAAGCTAACTTGGTTGCTAAAAAGTTTGAGTGTGGGAATTTCTGCACTGTGGACAAAAACGAGAAGTGTCTAATGGTTGGATGGAAGGAGACCCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1071 0.4127 MLLFHLQWNSSGGGGSGSPVQRVVFHFVQALLERIKRETGGRVTLKGCEKNEERELIEKLTSDTNMAVMCHQKIPFNQVMQFAGAQAIVEHVASQTKIHLINLDIGCGAQCTALMQALAERQERQVELLKITAIGLQGKTELEETGKRLVSFAKSLNLPFLYKVVFVTSIIEIKVEQFDIEHNEAVAVYSPYMLRTMVSDSDSLEHLMRVMRKIRPTIMIVLELEANHNSPSFVNRFIEALFFYAAFFECTETCMKQDYECRMRIEGILPEGIRNIVATEDGERTVRNVKIDVWRRFFARYRMVEIGFSESSLYQANLVAKKFECGNFCTVDKNEKCLMVGWKETPIHSISAWKFL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1937 356 Pfam GRAS domain family 16 354 IPR005202 -
Ssu7g1937 356 ProSiteProfiles GRAS family profile. 1 354 IPR005202 -
Ssu7g1937 356 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 2 354 - -
Ssu7g1937 356 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 354 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1937 Ssu-Chr7 38733476 38734546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1937 13 355 GRAS Transcription Factor Family AT3G03450 29.261 2.25e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ssu7g1937 GRAS 8.1e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1937 - - ccaj:109806982 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1937 7 38733476 38734546 Ssu7g1937 7 38733476 38734546 ECH