Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1932 ATGTCGCTGCTCGCCGCTTCCATCTCCTTAATCGGTGGGTTGAAATGGTTGCTTGTGTTGTTATCTTGCATGGTGTGGTTTGTGGCTGATTATGGTGCATGTGGTAGAACACTGGAACTTGAGGCACCTTCTTTGTCTCCAGCTGCAGCACCTGTTGTTGGTGGTGATCTGCCACTGCCGGCAAATGCCCCCGGGTTGAAGCATTTGCCTGCTCCAATTCCATCACGTGCCAATTTCACCAAAAATATTGCCCCTATGCATCCCATTGCTGATGCAGTTCCTTCTGCTCTCGCTCAGCCGCCATTGTCCCCTTATGTTTCTGATTGTTGCAAACAGGACATGGTGTGGAAACGAGGCAGTGAGGTTTGCCACTGTGCTTATCCCATAAAGCTAGACCTGCTTCTTTTGAATGTCTCTCAAAACCCCAACTGGAATGTTTTTCTCAATGATTTGGCCACCCAACTTGGGCTGAACACTACCCAAATtgagattattaaattttatctactcAGCTTGTCAACGTTGAATATATCGATGGATATCACTCCGCATAAAGGGATCAGTTTCTCTGCCGATGAGGCAGGTAAAATAAACTCATCGCTTTTGCAGCATAAGGTTCAGCTAGACCGTAGATTCGTGGGCGATTACAGGGTCCTCAATATAACCTGGTTTAAACCTCCACCTCCTTCTCGAGCTCCTACAATTGCTGCATCACCTACAAAAACTCCTCAGAGACAAGCACCTACAACTACATTATCGAGTACTTCAGACAGGGGAAGGCATTCAAATTTGCTTCTTGTTCTTGGAATTGTTACTGGTGTACTCTTCATTTCCATTGTATGTGTACTTATACTTTGCTTATGCACATTGCggccaaaaacaaaaacatctaCCACAGGAActgAAAAGCCAAGGATAGAAAGTGCAGTTCCAGCTGTTGGGTCTCTTCCCCACCCAACCAGTACACGCTTTATTGCTTATGAAGAACTTAaagaagcaacaaataattttgaaccaGTTAGCGTACTTGGAGAAGGTGGTTTTGGTAGAGTTTTTAGAGGTGTCTTAAATGATGGAACTGCTGTTGCAATTAAGAGACTTACTAGTGGAGGGCAACAGGGTGACAAAGAATTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTATAGCAATCGTGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCGAATGGAAGTTTGGAGGCCTGGCTTCatgGTCCCCTGGGAATAAATTGCCCTTTGGATTGGGACACCAGAATGAAGATTGCTCTTGATGCTGCAAGAGGACTTGCATACCTGCATGAAGATTCACAGCCCTGTGTTATACACAGAGATTTCAAGGCATCCAACATATTGCTCGAGAACAACTTTCATGCTAAAGTTGCAGATTTCGGTCTAGCTAAACAGGCACCTGAAGGCAGGGCTAATTATCTATCTACTCGAGTCATGGGCACATTTGGGTATGTAGCTCCAGAGTATGCTATGACAGGACACCTACTTGTTAAAAGTGATGTTTATAGCTACGGGGTTGTCTTGCTGGAATTGTTGACCGGAAGGAAACCAGTGGATATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTTGGCAAGGCCAATTCTTAGAGATAAGGACCGGTTGGAAGAACTTGCTGATCCAAGGCTTGGCGGAAGGTACCCAAAGGAAGATTTTGTACGTGTTTGCACTATAGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTACAGCGGATCACAGAATCACACGATCCTGTGTTAGCCTCATCCAATACACGGCCCAACCTGAGACAGTCCTCTACCACTTATGAGTCTGATGGGACATCTCAATGTTTTCTTCGGGTCCTTACTCTGGTCTAA 1977 0.4385 MSLLAASISLIGGLKWLLVLLSCMVWFVADYGACGRTLELEAPSLSPAAAPVVGGDLPLPANAPGLKHLPAPIPSRANFTKNIAPMHPIADAVPSALAQPPLSPYVSDCCKQDMVWKRGSEVCHCAYPIKLDLLLLNVSQNPNWNVFLNDLATQLGLNTTQIEIIKFYLLSLSTLNISMDITPHKGISFSADEAGKINSSLLQHKVQLDRRFVGDYRVLNITWFKPPPPSRAPTIAASPTKTPQRQAPTTTLSSTSDRGRHSNLLLVLGIVTGVLFISIVCVLILCLCTLRPKTKTSTTGTEKPRIESAVPAVGSLPHPTSTRFIAYEELKEATNNFEPVSVLGEGGFGRVFRGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTLARPILRDKDRLEELADPRLGGRYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITESHDPVLASSNTRPNLRQSSTTYESDGTSQCFLRVLTLV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1932 658 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Ssu7g1932 658 Gene3D Phosphorylase Kinase; domain 1 318 414 - -
Ssu7g1932 658 MobiDBLite consensus disorder prediction 230 257 - -
Ssu7g1932 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Ssu7g1932 658 PANTHER OS01G0750732 PROTEIN 72 649 - -
Ssu7g1932 658 SUPERFAMILY Protein kinase-like (PK-like) 313 614 IPR011009 -
Ssu7g1932 658 Pfam Protein kinase domain 338 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1932 658 MobiDBLite consensus disorder prediction 622 642 - -
Ssu7g1932 658 MobiDBLite consensus disorder prediction 235 257 - -
Ssu7g1932 658 ProSiteProfiles Protein kinase domain profile. 337 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1932 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 72 649 - -
Ssu7g1932 658 Gene3D Transferase(Phosphotransferase) domain 1 415 631 - -
Ssu7g1932 658 CDD STKc_IRAK 343 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1932 Ssu-Chr7 38664195 38668830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1932 10 651 Receptor kinase-like Gene Family AT4G02010 65.198 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Ssu7g1932 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1932 - - gmx:100792818 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1932 7 38664195 38668830 Ssu7g1932 7 38664195 38668830 ECH
Ssu4g1157 4 18454900 18459618 Ssu7g1932 7 38664195 38668830 PCT
Ssu4g0568 4 9086361 9092372 Ssu7g1932 7 38664195 38668830 PCT