Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1909 ATGGTGGCTGAAGCAGAGCTTGTGTGTCAACAGAACGTGGGTGTGTTGGATGTGAAGCATTTTCCAAATAAAGGAAACGATGTTCACGAGATCGGAGATGCAGATGCAAATTCGCCTCCGAGTTTTGACCGAGTTCGTGCTTCTGAGTCGGTCTCCGCCGAGTTGCTCACTTCACAAGAAGATGTTAGGTCTGCAGACGGGATCTCAGATGCTGCTCTTGAATCTGCGGTTCTGCAATTTATCCCTTGCATCCGTTCTGGTAGTTTTGCTGACATTGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCGTCACATCTGGGATCAATATACAACTTTCCCAAACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAgcttatataagaaaaaacgTGATAAAATTCTTCTTCGAGGATGTCAGCTTCCCACAGACATCTGAAGTCAATAACGTATTTTTGGAAGAGGTAGAGGATTCCCTCACAAAGGCTTTTCTTTTGGCTGATTCAGCTTTGGCCGATGATTGCAGTGTGAATAGTTCATCAGGCACCACTGCTCTTACTGCTTTGATATTTGGAAGGTATATCCTAATATGCATACTTTACGTTCTTGGTTCTCCTTTATTTGCACACTTTTAG 672 0.4301 MVAEAELVCQQNVGVLDVKHFPNKGNDVHEIGDADANSPPSFDRVRASESVSAELLTSQEDVRSADGISDAALESAVLQFIPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSIYNFPKPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVNNVFLEEVEDSLTKAFLLADSALADDCSVNSSSGTTALTALIFGRYILICILYVLGSPLFAHF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1909 223 ProSiteProfiles PPM-type phosphatase domain profile. 85 223 IPR001932 -
Ssu7g1909 223 PANTHER PROTEIN PHOSPHATASE 2C 1 209 IPR015655 GO:0004722|GO:0006470
Ssu7g1909 223 Gene3D - 69 212 IPR036457 -
Ssu7g1909 223 SUPERFAMILY PP2C-like 79 209 IPR036457 -
Ssu7g1909 223 Pfam Protein phosphatase 2C 95 208 IPR001932 -
Ssu7g1909 223 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Ssu7g1909 223 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1909 Ssu-Chr7 38178235 38179648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1909 1 209 PP2C-type Phosphatase Gene Family AT1G48040 50.472 2.04e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1909 K14803 - gmx:100819791 384.03