Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1908 ATGGTGGCCAATGCTGGTGACTGCCGAGCAGTTCTTTGTCGCAAAGGAGAGGCTATTGACATGTCTCAAGATCACAGGCCTAATTATGCATCAGAGCGGAGGCGAGTTGAAGAATTGGGTGGCTACATAGACGATGGTTATCTCAATGGAGTTTTATCAGTAACTCGAGCGCTAGGGGACTGGGACGTGAAGTTACCCAAGGGTGCTCCCTCCCCTTTGATTGCAGAGCCTGAGTTCCGGCAAGTGGTTCTAACAGAGGATGATGAGTTCCTCATCATAGGATGCGATGGCATCTGGGATGTGATGTCAAGTCAGCATGCTGTTAGCCTTGTTCGTAGAGGCCTGAGGCGGCATGATGACCCAGAGAAATGTGCCAGGGACCTGGTTATGGAGGCATTACGCTTGAACACATTTGACAATCTCACGGTGATCATTGTATGCTTCTCTTCCCTTGACCACATGGAGCCAGAGCCTTCCCCCCCTCGCCAACGGAAATTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTAAGGAGCTTGTTGGAAGGCAGTGCTAGCAACtga 570 0.507 MVANAGDCRAVLCRKGEAIDMSQDHRPNYASERRRVEELGGYIDDGYLNGVLSVTRALGDWDVKLPKGAPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRRGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHMEPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1908 189 PANTHER PROTEIN PHOSPHATASE 2C 1 171 IPR015655 GO:0004722|GO:0006470
Ssu7g1908 189 ProSiteProfiles PPM-type phosphatase domain profile. 1 148 IPR001932 -
Ssu7g1908 189 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 171 - -
Ssu7g1908 189 Gene3D - 1 166 IPR036457 -
Ssu7g1908 189 SMART PP2C_4 1 146 IPR001932 -
Ssu7g1908 189 SUPERFAMILY PP2C-like 2 150 IPR036457 -
Ssu7g1908 189 CDD PP2Cc 2 148 IPR001932 -
Ssu7g1908 189 Pfam Protein phosphatase 2C 2 140 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1908 Ssu-Chr7 38177379 38177948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1908 1 185 PP2C-type Phosphatase Gene Family AT3G62260 68.817 2.25e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1908 K14803 - gmx:100785388 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1908 7 38177379 38177948 Ssu7g1908 7 38177379 38177948 ECH