Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1906 atggCTAGATTTCTACACATGCATGTAACGCTCTCTAGCTTGGTTCTAATCCACTCAGTTTTGCCATGGGCCTCTGCATCTTTGAAGGTTGATTTCTATAAAACCACGTGTTCATCTGTGGAGGCAATAGTGAGAAGGGTCGTAAACAAAGTTGTTTCTCTCAACCTAGGCGTCACTGCTGatattctttcttttgctGCTCGAGACAATGCGAGCAAAGTTGGGGGCATAAACTACGTCGTGCCAGCCGGACGCAGAGATGGTTGTGTCTCTATCAGCAACGAAGTTGCACAAAATCTACCCCCTCCAACCTTCAACGCACAACAACTTATTAGTAGCTTTGAGCGAAAAGGGTTATCTGCAGACGAAATGGTGACACTGTCTGGAGCCCATTCTATTGGTGTGTCATATTGTTCCTCCTTCTCCAATTGCTTGTACTCTTTCAATGCCACGTTTCCTCAAGATCCCTCGATGGACCCCAAGTTTGGCACGTTGTTGAAAACCAAGTGTCCACCACGTAGCAATGATATTGGTGATAACACAGTGGCACTTGATGCTTCCACGTCGAACCGTTTGGACAACAATTACTACAAAGGGCTCAAGAACCACCGTGGTTTGTTGACCTCAGATCAGACATTGCTGACCAGCCCCTCAATGAAGTCAATGGTGCTAAGCAATGCTAAACAAGCTGGTTCAATTTGGGCACTCAAGTTTGCCAAGGCAATGGTGCACATGGGTTCCATTGACGTGCTAACAGCCTCACAAGGCGAGATCAGTAGGCATTGTAGCGTCGTAAATTAA 801 0.4544 MARFLHMHVTLSSLVLIHSVLPWASASLKVDFYKTTCSSVEAIVRRVVNKVVSLNLGVTADILSFAARDNASKVGGINYVVPAGRRDGCVSISNEVAQNLPPPTFNAQQLISSFERKGLSADEMVTLSGAHSIGVSYCSSFSNCLYSFNATFPQDPSMDPKFGTLLKTKCPPRSNDIGDNTVALDASTSNRLDNNYYKGLKNHRGLLTSDQTLLTSPSMKSMVLSNAKQAGSIWALKFAKAMVHMGSIDVLTASQGEISRHCSVVN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1906 266 Pfam Peroxidase 59 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PANTHER PEROXIDASE 22 60 - -
Ssu7g1906 266 PANTHER PEROXIDASE 60 264 - -
Ssu7g1906 266 PANTHER PEROXIDASE 25-RELATED 22 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PANTHER PEROXIDASE 25-RELATED 60 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 SUPERFAMILY Heme-dependent peroxidases 28 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 Gene3D - 60 266 - -
Ssu7g1906 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 123 133 IPR019793 -
Ssu7g1906 266 PRINTS Haem peroxidase superfamily signature 123 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PRINTS Haem peroxidase superfamily signature 57 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PRINTS Haem peroxidase superfamily signature 75 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 Gene3D Peroxidase, domain 2 101 245 - -
Ssu7g1906 266 PRINTS Plant peroxidase signature 199 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PRINTS Plant peroxidase signature 34 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 PRINTS Plant peroxidase signature 240 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1906 266 ProSiteProfiles Plant heme peroxidase family profile. 60 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1906 Ssu-Chr7 38164670 38165768 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1906 60 266 Peroxidase AT1G05260 42.105 9.18e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1906 K00430 - gmx:100815158 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1906 7 38164670 38165768 Ssu7g1906 7 38164670 38165768 ECH