Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1904 ATGTTGCTTATCGATGTCTGCTCCTTGGTCTACAAGGAACTTAACCAGCTTAGTGTTTCCTTCACTTACTGCAGCATGCAGAGCGATGGTTCTATTCCTTTTGGGTCGTGTCAGATCAACACTACTTTGGGGAAGCTGATAATATTGAACTTGAGGCCTCTGCCTTGCATGATGGGGTataaagcttttataaaagtagAATCTGAATGCTATAAGTGGCTCTCTAGCTTGGTTCTAATCCTCTTAGTTTTGCCATGGACCTCCACATCTTTGAAGGTTGATTTCTATAAAACCACATGTCCATCTGCGGAGGCAATAGTGAGAAGAGCCATAAACAAAGCCGTCTCTCTCAACCCAGGCATCGTTGTTGGTTTGATCAGAATGCATTTTCATGATTATTTTGTGAGGgGCTGTGATGGTTCTGTACTATTAGAGTCCACACCGAGTAACCCATCGGAGAGAGAGCACCCTGCCGACAACCCAAGTTTACGAGGCTTCGAAGTGATCAATGAGGCTAAGGCTCAAATAGAGGCAGAGTGTCCTCACACAGTGTTGTGTGTAGACATTCTTGCTTTTGCTGCTCGAGACAGCGCGAGCAAAGTTGGGGGCATAAACTATGCCGTACCCATCGAACGCATAGATGGTCGTGTCTCTATCAGTAACGAAGTTGCACAAAATCTGCCCCCTCCAACCTTCAACGCACAACAACTTATTAATAGCTTTAAGCGAAAAGGGTTGTCTGTAGACGAAATGGTGACATTGTTTGGAGCCCATTCTATTGGTGTGTCACATTATTCCTCCTTCTCCAACCACTTGTACTCTTTCAATGCCATGTTTCCTCAAGATCCCTCGATGGACCCCAAGTTTGGCACGTTGTTGAAAACCAAGTGTCCACCATGTAGCAATGATATTGATGATAACATAGTGGCGCTGGATGCTTCCACACCGAACCGTTTGGACAACAATTACTACAGGGGGCTCAAGAACCACCGTGGTTTGTTGACCTCCGATCAGACGTTGTTGACCAGCCCCTCAACGAAGCCAATGGTGCTAAGCAATGTTAAACAAGCTAGTTCAATCTGGGCACTCAAGTTTGCCAAGGCAATGGTGCACATGGGTTCCATTGACGTGCTAACAGCCTCACAAGGCGAAATCAGGAAGAGTTGTAGCGTCGTAAATTAA 1182 0.4518 MLLIDVCSLVYKELNQLSVSFTYCSMQSDGSIPFGSCQINTTLGKLIILNLRPLPCMMGYKAFIKVESECYKWLSSLVLILLVLPWTSTSLKVDFYKTTCPSAEAIVRRAINKAVSLNPGIVVGLIRMHFHDYFVRGCDGSVLLESTPSNPSEREHPADNPSLRGFEVINEAKAQIEAECPHTVLCVDILAFAARDSASKVGGINYAVPIERIDGRVSISNEVAQNLPPPTFNAQQLINSFKRKGLSVDEMVTLFGAHSIGVSHYSSFSNHLYSFNAMFPQDPSMDPKFGTLLKTKCPPCSNDIDDNIVALDASTPNRLDNNYYRGLKNHRGLLTSDQTLLTSPSTKPMVLSNVKQASSIWALKFAKAMVHMGSIDVLTASQGEIRKSCSVVN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1904 393 Gene3D Peroxidase, domain 2 228 372 - -
Ssu7g1904 393 PRINTS Plant peroxidase signature 124 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 183 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 249 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 310 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 367 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 100 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 326 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 202 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Plant peroxidase signature 164 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 Gene3D - 94 393 - -
Ssu7g1904 393 ProSiteProfiles Plant heme peroxidase family profile. 90 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 SUPERFAMILY Heme-dependent peroxidases 91 393 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PANTHER PEROXIDASE 82 391 - -
Ssu7g1904 393 CDD secretory_peroxidase 91 392 IPR033905 GO:0004601|GO:0042744
Ssu7g1904 393 PANTHER PEROXIDASE 25-RELATED 82 391 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Haem peroxidase superfamily signature 122 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Haem peroxidase superfamily signature 184 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Haem peroxidase superfamily signature 312 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 PRINTS Haem peroxidase superfamily signature 202 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g1904 393 Pfam Peroxidase 107 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1904 Ssu-Chr7 38137505 38142150 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1904 76 393 Peroxidase AT1G05260 42.857 1.05e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1904 K00430 - gmx:100813563 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1904 7 38137505 38142150 Ssu7g1904 7 38137505 38142150 ECH