Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1875 ATGACAATGAAGCTGCTTTTGGTAGCCGTTGAACTTGCATGCTTAGTTTGTGGGATCTTCTCCTTTGGATCTGAGACACTGTCTACGCTTTCTTTCTTAGAAAACGATGCCGTCTCAACAAGGGCTTCCTCCTCACCTCAACCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGGAGCTGATTCTAAAGGAGctgTCTGTTTGGATGGAACTTTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGTAACACCATCAGAAACTGCGTCTACAGAAAAAATACTCGTCGTGGTTCCTCAAAATACATGGAAAATCAAATACCATTCACTGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAATTACGGTATTGTGATGGAGCATCTTTCAGTGGAGATAGCGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAGTTAATGTCCAAAGGAATGCAGAAAGCCAACCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGGCTGGCATCCATAATTCATTGTGATGAGTTCCGGAGCTTGTTTCCAAAATCTTCCAAAGTGAAATGTTTGAGTGATGCAGGTTTTTTCCTTGATGcAATTGATGTATCTGGGGGACGCACACTGAGGAATCTGTTTGGAGGTGTGGTTCAGTTACAGGAGGTACAAAAACATCTGCCAAAAAGTTGTCTCAACCAACTGGACCCAACTTCGTGCTTCTTTCCCCAGAATATGGTCGAACATATTGAGACCCCATTGTTTCTACTCAACGCAGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCACCTACAGCTGACCCCCTTGGCTCTTGGAATGACTGCAAATCGAACCATGCAAATTGtagctcatctcaaattcagtTCCTCCAAGACTTCAGAAATCAAATGCTGAGTGACATTAAAGACGTCTCAAGGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCCCTTATCGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGa 1257 0.4312 MTMKLLLVAVELACLVCGIFSFGSETLSTLSFLENDAVSTRASSSPQPQPLMVDLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGADSWLIHLEGGGWCNTIRNCVYRKNTRRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEELMSKGMQKANQALLSGCSAGGLASIIHCDEFRSLFPKSSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQEVQKHLPKSCLNQLDPTSCFFPQNMVEHIETPLFLLNAAYDVWQVQASLAPPTADPLGSWNDCKSNHANCSSSQIQFLQDFRNQMLSDIKDVSRSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1875 418 Pfam Pectinacetylesterase 48 396 IPR004963 GO:0016787
Ssu7g1875 418 PANTHER PECTIN ACETYLESTERASE 2 416 - -
Ssu7g1875 418 PANTHER NOTUM-RELATED 2 416 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1875 Ssu-Chr7 37616227 37620685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1875 1 417 Carbohydrate Esterase AT3G62060 65.734 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1875 K19882 - gmx:100786972 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0508 4 8019469 8024862 Ssu7g1875 7 37616227 37620685 PCT