Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1864 ATGGCATTAGATCGTAAACCATATGGTCGTAAACCAGCCGAGGTTGGCCTTGTGAGGAGTTCTCGTCATTGTCAAGCTACTGTTGCTAGTAATTTCATCGCCAAGTCAATTGCATTCGAGAACACGGCTGGTGCAAAAGCAGGCCAAGCAGTGGCACTTTGTGTGCAAGGTGATCGTTCAGTATTTTTTGATTGTGCGATGCGTGGTTACCAAGACACATTGTTGGCTTACAACCACCGTCAGTTCTACCGAAGTTGCGAAATATCTGGAACAATCGACTTTATCTTCGGCTTCTCCACCACCTTAGTTCAGAAGTCAAAAATCATAGTGAGGAGACCCTTGCCAAAACAAAAGAACGTAGTGGTGGCAGATGGCACAAGCAAGAAGAACATGCCCACTGGAATAGTCCTCCACAACTGCGAGATCATGCTGGATCCTACCCTTTTTGTTGATCGCTTCACTGTGAAAACTTACTTGGCCAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTTATTGAGAATGTTATTGGCGACTTGATTCAGCCAGAAGGTTATATTCCTTGGAGCATAGAAGAACCAAACACTCAGCATTGTTACTTTGCTGAGTTTGACAACACCGGACCAGGTGCCCTTACTCAAGCAAGGGCCAAGTTTGCCAAAGGTCTCATTAGTAAGGAGGAGGCTTCGAAATTCACTGCCGAACCATGGCTCCAAGCTAGCACTTGGTTGCCTGCTACTGGCATTCCTTTCGATCCAGGCTTCATCAAAGCTTAG 774 0.4651 MALDRKPYGRKPAEVGLVRSSRHCQATVASNFIAKSIAFENTAGAKAGQAVALCVQGDRSVFFDCAMRGYQDTLLAYNHRQFYRSCEISGTIDFIFGFSTTLVQKSKIIVRRPLPKQKNVVVADGTSKKNMPTGIVLHNCEIMLDPTLFVDRFTVKTYLARPWKAFSRAVFIENVIGDLIQPEGYIPWSIEEPNTQHCYFAEFDNTGPGALTQARAKFAKGLISKEEASKFTAEPWLQASTWLPATGIPFDPGFIKA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1864 257 PANTHER PECTINESTERASE 26 254 - -
Ssu7g1864 257 PANTHER PECTINESTERASE 26 254 - -
Ssu7g1864 257 Pfam Pectinesterase 26 239 IPR000070 GO:0030599|GO:0042545
Ssu7g1864 257 ProSitePatterns Pectinesterase signature 2. 88 97 IPR033131 -
Ssu7g1864 257 SUPERFAMILY Pectin lyase-like 21 252 IPR011050 -
Ssu7g1864 257 Gene3D - 13 256 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1864 Ssu-Chr7 37509209 37511481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1864 29 254 Carbohydrate Esterase AT3G62170 47.137 1.12e-65 212