Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1859 ATGGTTCCAATCTTCTTGTACATCGTCGCTTTCTGTTGCACGTGCGGAGCTATTGCGTTGGCCTTGCTACACATTTATGGGCACCTCCTCAATTACACCGAGCCCACTTATCAGCGCTTCATTGTTCGGATCGTTTTTATGGTTCCAGTTTATGCGTTGATGTCATTCTTGTCCCTTGTTCTACCAGAGGGttcaatctattttaattcaatccGGGAAATCTATGAAGCTTgggttatttataatttcctaTCACTGTGTCTTGAATGGGTTGGCGGTCCTGGAGCAGTGGTCCTAAGCTTAAGTGGACGGATTCTGAAGCCATCATGGTTTCTGATGACTTGTTGCTTACCTCCTCTAGCGCTTGATGGGCGTTTTATACGTAAATGCAAGCAAGGGTGTTTGCAGTTTGTGATTTTGAAGCCCATTTTAGTTGTTGTTACACTTATACTTTATGCGAAGGGGAAATATAAGGATGGGAATTTCAGTCCAAAGCAATCATACTTGTATCTTACAATCATCTATACATTCTCATACACAATGGCTCTCTATGCTCTTGCTTTGTTTTATGTGGCGTGCAAGGATCTTCTTCAACCATTCAATCCAGTCCCaaagtttattataataaaatctgTTGTATTCCTGACTTATTGGCAGGGTGTCTTAGTTTTCCTCGCTGCAAAGTCAGAATTAGTTAAGGATGCAGATGAAGCTGCTCTACTTCAAGATTTTATCATTTGTGTTGAGATGCTTCTTGCTGCTGTTGGCCACTTTTATGCATTTCCATACAAAGAATATGCTGGGGCTAACATAGGTGGATCCCGTGGGTTGACAGCTAGCCTTGCTCATGCTTTGAAGTTGAATGACTTTTACCACGATACAGTCCACCAGTTTGCACCAACATACCATGATTATGTTCTCTACAACCACGGTGAAGGTGAAGAGGGAACTAGGAAGTATAGGTCACGAACTTTTGTTCCAATTGGCCCAGAGATGGACAGTGTGAGAAGAAACAAGCATTTGTTTGGAAACAAGTCAGATGACATACTGCTCTCAGGTTTTTCTTCTAATAGTAGCACTCCCACAAATTCTGGTCCCATCTCTGATGTTTCACATTCTGGTGCAATGAAATCTTCCTTACTTGTGGATGTGTCAAATTCTTTATCTGTGCCATACGATATGACACTTATCGACTTGGATGCATCCAATTATCCTGAAAAAGTTCCAGCAGCTGATAAAGTTGGTACTAGGTGA 1254 0.4035 MVPIFLYIVAFCCTCGAIALALLHIYGHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPEGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGAVVLSLSGRILKPSWFLMTCCLPPLALDGRFIRKCKQGCLQFVILKPILVVVTLILYAKGKYKDGNFSPKQSYLYLTIIYTFSYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSELVKDADEAALLQDFIICVEMLLAAVGHFYAFPYKEYAGANIGGSRGLTASLAHALKLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSRTFVPIGPEMDSVRRNKHLFGNKSDDILLSGFSSNSSTPTNSGPISDVSHSGAMKSSLLVDVSNSLSVPYDMTLIDLDASNYPEKVPAADKVGTR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1859 417 PANTHER BNAA05G31380D PROTEIN 4 414 - -
Ssu7g1859 417 Pfam Organic solute transporter Ostalpha 7 266 IPR005178 -
Ssu7g1859 417 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 4 414 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1859 Ssu-Chr7 37382698 37386185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1859 - - gmx:100789701 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0494 4 7837121 7838879 Ssu7g1859 7 37382698 37386185 PCT
Ssu7g1859 7 37382698 37386185 Ssu4g0944 4 15053837 15061425 PCT