Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1820 ATGGCGGGTCGTGTTATTCCACTCTTGGCCATGATTATTGTACAATTGGGCTATGCAGGGATGAATATTACCTCAAAGCTTGCAATACAATCTGGCATGCACCCTCTTGTCCTTGTTGCTTATCGGCAAATTTTTGCGACTCTATCCCTTGCTCCCTTCGCTTACTGGTTAGAAAGGAATACGGTTCCCCAGATGACAATGCGCATTGCGTTCCAGATATTATTATCTTCCTTAACAGGAGTAACAGGAAATCAGATACTATACTTCGTGGGGCTTAAATATTCAACCCCTACAATTGCATGTGCACTAAACAATTTGCTCCCAGCATTCACTTTTGTTCTTGCAGTCCTCTTCAGACAAGAGTATTTGAGAATCAAGACGAAGGCCGGGGTAGCGAAGGCATTAGGGACAGTCCTTAGTGTGGGTGGAGCCGTGCTTTTATCATTTTACCACGGAAAAGTCCTTGGTCTAGGTGAGTCAAGTATTCACTGGAGATACGCAGACAAAATGGAAAGAGAAGCCTCTTCGGGTAGTGGAACAAACATAATTCTGGGCCCCGTTGCTGTAATTGGTAGTGCTCTTGTTTGGGCAGTATGGTTCATAGTTCAAGCAAACATGAGCAAGAGCTTTCCAGCTCCTTATACTAGCAGCCTCTACATGTGTTTCATGGCAAGCATTCAGTGTGTGGCCATTGCCTTGTCTGTTGAACAGAAAGCCTCAGCCTGGTCACTCCACAGTACGATCAGACTTACCTCCTCACTTTATGCGGGGACTATTTCTACTGGGCTAGCGTATGTTCTCCTTTCGTGGACCATTGAGAGGAAAGGTCCTCTCTATGTGTCTGTTTTCTCCCCTTTGCTGCTTGTCATCATCACTGTCATCAGCTGGGCTCTGCTTCACGAGGAATTATACGTTGGCACtGCCATAGGGTCTCTGCTGATAGTGTTGGGGCTCTATTTTGTTTTGTGGGGAAAGAACAAAGAGATGATTAAGACAGACGCTGTTCAAGACACAGTCATGGAGGCAATCAAGGATAGCGAGAGGGACGACGCGAAAGACCTGGAATTGCAACCCTATGATCCTGCCAACGGTAACGGTAACCGTCATGATGCTTATTAA 1119 0.4593 MAGRVIPLLAMIIVQLGYAGMNITSKLAIQSGMHPLVLVAYRQIFATLSLAPFAYWLERNTVPQMTMRIAFQILLSSLTGVTGNQILYFVGLKYSTPTIACALNNLLPAFTFVLAVLFRQEYLRIKTKAGVAKALGTVLSVGGAVLLSFYHGKVLGLGESSIHWRYADKMEREASSGSGTNIILGPVAVIGSALVWAVWFIVQANMSKSFPAPYTSSLYMCFMASIQCVAIALSVEQKASAWSLHSTIRLTSSLYAGTISTGLAYVLLSWTIERKGPLYVSVFSPLLLVIITVISWALLHEELYVGTAIGSLLIVLGLYFVLWGKNKEMIKTDAVQDTVMEAIKDSERDDAKDLELQPYDPANGNGNRHDAY 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1820 372 PANTHER WAT1-RELATED PROTEIN 1 339 - -
Ssu7g1820 372 PANTHER WAT1-RELATED PROTEIN 1 339 IPR030184 GO:0016021|GO:0022857
Ssu7g1820 372 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020|GO:0016021
Ssu7g1820 372 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020|GO:0016021
Ssu7g1820 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 327 - -
Ssu7g1820 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1820 Ssu-Chr7 36772446 36777424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1820 5 370 Nodulin-like Gene Family AT1G09380 53.279 5.08e-145 414