Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1812 ATGGCGCGCACGCCTAAACCCAAAGGCGGCTCCACCTCCGCCTCCGccgccaccgccaccgccaccgccTTCTTCAAACCTGGCACTGCGGTGGAAGTCAGCTCCGAGGACGAAGGCTTCCGCGGCTCCTGGTTTTCCGGCTCCATCATCCGCCGCCTCGCCTCCGACAGATTCTTGGTGGAGTATGACAACCTGATGGCGGACGATAAAAGCTCGAAGCACTTGAGAGAAGTCCTCGGTCTCCGCCACCTCCGGCCCCTTCCCCCGCCGGAGACCGACCACAAATTCAAGTTTGGCGACGAGGTTGACGCTTTGCACAACGATGGGTGGTGGGAGGGCCACATTACCCAAGAATTGGAGAACGAAAGATTCGCAGTGTATTTCAGAGGGTCGAAGGAGCAATTGGTGTTTCCCAAGGAGCAACTCAGGCTCCACCGCGAGTGGTTCAATCACAATTGGGTCCCACCGCtgcaacaaccacaacaacagGATAATGGTGAACTGAAGAAAGTGTTGTTGACATCGAATGTGAAGTCTGTTGAAACTGTGAAGGAGGAGGAGTTTAGGGTAGGGACGGTAGTTGAGGTTAGCAGTGACGAAGATGGGTTCAGTGGAGCTTGGTTTGCTGCCGCTGTTGTTGAGGCAAAGGGGAAGGACAAGTTTGTTGTTGAGTACCAGAGTCTGCTTGATGATGATTCCCAGCTTTTGAAAGAGGAGATTGACGTCCTGCACATAAGGCCTCATCCGCCAGACGCTAGTGTTGCTGGTCAATTCCGTCTTCTTGATGAAGTTGATGCTTTGTACAATGACGGTTGGTGGGTGGGTGTGATTTCTAAAGTTCTTGCGGATTCAAGGTATATAGTTTACTTCAGGTCTTCTAATGAAGAACTAGAGTTTCAGCACTCCCAGTTGAGGCTGCACCAGGACTGGATTGATGGCAAATGGGTCATGCCTTCTAAGGGGAACCACAACATCCTATACAAAGCACTGCCCAACCGCATCCCCAAAATCATAACTCCCTCCTTCTATGGCTCTCAGCTTTTCTTtcagaatctcaaaattctccTTGGTCCTGAAGTTTTAGGCATAACAATGAGGGCAGAGTGTAAGGCTGGTGGGTTTTGGAGGCCTTTAAAGGAGGGCATTAAATCTCGCTCTTGA 1161 0.4849 MARTPKPKGGSTSASAATATATAFFKPGTAVEVSSEDEGFRGSWFSGSIIRRLASDRFLVEYDNLMADDKSSKHLREVLGLRHLRPLPPPETDHKFKFGDEVDALHNDGWWEGHITQELENERFAVYFRGSKEQLVFPKEQLRLHREWFNHNWVPPLQQPQQQDNGELKKVLLTSNVKSVETVKEEEFRVGTVVEVSSDEDGFSGAWFAAAVVEAKGKDKFVVEYQSLLDDDSQLLKEEIDVLHIRPHPPDASVAGQFRLLDEVDALYNDGWWVGVISKVLADSRYIVYFRSSNEELEFQHSQLRLHQDWIDGKWVMPSKGNHNILYKALPNRIPKIITPSFYGSQLFFQNLKILLGPEVLGITMRAECKAGGFWRPLKEGIKSRS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1812 386 Pfam Agenet domain 99 157 IPR008395 -
Ssu7g1812 386 Pfam Agenet domain 191 250 IPR008395 -
Ssu7g1812 386 Pfam Agenet domain 28 89 IPR008395 -
Ssu7g1812 386 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 20 321 - -
Ssu7g1812 386 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 20 321 - -
Ssu7g1812 386 SMART agenet_At_2 256 312 IPR014002 -
Ssu7g1812 386 SMART agenet_At_2 94 150 IPR014002 -
Ssu7g1812 386 SMART agenet_At_2 186 253 IPR014002 -
Ssu7g1812 386 SMART agenet_At_2 23 92 IPR014002 -
Ssu7g1812 386 Gene3D - 178 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1812 Ssu-Chr7 36711816 36714550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1812 198 322 PHD Transcription Factor Family AT5G58610 28.378 8.65e-08 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1812 7 36711816 36714550 Ssu7g1812 7 36711816 36714550 ECH