Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1807 ATGGCGTCGTTCGATCCGAGCGTAGATTCAAGTAATTCAGACACGTTGCGAGAATCCAATCAGAAGAAGCGCAGGAAAATCGGAGACCAGGCCGTAGATCACAATTCCGTCAACGCCGTCCCGTGGAGATCCGAGGCGGAGCAGCGGATCTACTCGCGCCGGCTCGTGGAGGCTCTCCGGCGGACTCCGTCATCGGCGACCAAGCCTAGAGCCGCCGGCCAAGTCCGTGAGACCGCCGACCGAGTCCTCGCCACCACCGCGAGAGGCAGAACGCGGTGGAGCCGCGCGATCCTCGGCCGGTGGAGGAAGCTCCCGAGCCAGCACAAGAAGGTGAAGAAGGCATCATCCACCACTGGATTGAAGAGAACGAGGATTGGCGGAGAGAGGAGGAACCGGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCCGGTTGCCGGAAGGTCTCGTTCCCGAACCTTCTGGAAGAAGCCACGGACTATATTTCCGCCCTGGAGATGCAAGTGCGAGCCATGACGGCTCTCGCCCAACTGCTCGCCGGCGATGAGCCGGCTGGACTCGCCGGTGGCGCGTTGAGTTGA 594 0.6195 MASFDPSVDSSNSDTLRESNQKKRRKIGDQAVDHNSVNAVPWRSEAEQRIYSRRLVEALRRTPSSATKPRAAGQVRETADRVLATTARGRTRWSRAILGRWRKLPSQHKKVKKASSTTGLKRTRIGGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAQLLAGDEPAGLAGGALS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1807 197 MobiDBLite consensus disorder prediction 16 31 - -
Ssu7g1807 197 PANTHER TRANSCRIPTION FACTOR BHLH150 13 196 - -
Ssu7g1807 197 MobiDBLite consensus disorder prediction 1 15 - -
Ssu7g1807 197 MobiDBLite consensus disorder prediction 1 42 - -
Ssu7g1807 197 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 196 IPR044660 GO:0006355
Ssu7g1807 197 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 183 IPR036638 GO:0046983
Ssu7g1807 197 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Ssu7g1807 197 CDD bHLH_AtIBH1_like 125 180 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1807 Ssu-Chr7 36668603 36669196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1807 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.361 1.20e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1807 - - gmx:100783462 322.783