Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1801 ATGTCCGACAAGAAAGACAGAGAGCAGTACGGCGTGCTCCTCTATTACAAGTACGCTGAAATTCCCAACCTCAACGACCTCGTTAGCTTCTACCACTCCAACTGCTCCTCCCTCCGCCTCCTTGGTCGTGTTCGCCTTTCTTCCCACGGCGTCAATGTCACCGTTGGCGGCAACTTATCTTCTCTCGAGAGCCACATCGAGGCCCTCAAAGCCTACAACACCTTGTTTCACGCCACCGATTTCAAGCTCGCCACGTGTCATCACCCACTTAACGACAAAGTCGCCAAGGAGTGTGGATTCACCTCTCTCTCTATTCGGATCGTTGACGAACTTGTTACTCTCAGTTCCCATCCACTGTTAAAGTCACCACATATCTCCAATGCTGGAAAGCACCTCTCTGCACACGAGTTCCATTCTTCTCTTCATAATGCCAACAAGGAGAGTCCCGAAAACTGCCTTGTTTTACTCGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAGTTTCATGTGCCAAATGTTGAAACTTTGGATCCACAAGTTAGGCAGTATAGTGATTTGTCTTCGTGGATAGATGATAATGGTGAGcggttgaaaggaaaaaatatccTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCTCAGATGGTGGTTTTTCAAAGgaaagaattttgtttttgatcaCCGGATATCAGTTGGAAGTTCAGATGCTAATGTTATTGGTACCTGCCTTATTTGTCAATGTTCATTTGATGATTACACTTCTCGCTGCCGGTGTACTTACTGCAGAATGCTTGTCTTGGTTTGTTCTAGTTGCCAGAGTGAATCTACACCGTATGTTTGTGAGCTATGTCAGAAACAGAGCAAGGCTGTCAGGTTGA 972 0.4352 MSDKKDREQYGVLLYYKYAEIPNLNDLVSFYHSNCSSLRLLGRVRLSSHGVNVTVGGNLSSLESHIEALKAYNTLFHATDFKLATCHHPLNDKVAKECGFTSLSIRIVDELVTLSSHPLLKSPHISNAGKHLSAHEFHSSLHNANKESPENCLVLLDARNLYETRIGKFHVPNVETLDPQVRQYSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFSDGGFSKERILFLITGYQLEVQMLMLLVPALFVNVHLMITLLAAGVLTAECLSWFVLVARVNLHRMFVSYVRNRARLSG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1801 323 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Ssu7g1801 323 SMART rhod_4 139 246 IPR001763 -
Ssu7g1801 323 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 129 243 IPR036873 -
Ssu7g1801 323 Gene3D - 1 112 - -
Ssu7g1801 323 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 250 IPR020936 -
Ssu7g1801 323 Gene3D - 121 260 IPR036873 -
Ssu7g1801 323 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 250 - -
Ssu7g1801 323 ProSiteProfiles Rhodanese domain profile. 153 245 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1801 Ssu-Chr7 36574357 36577849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1801 5 253 Sulfurtransferasese or Rhodanese AT1G09280 74.297 1.17e-132 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1801 - - vun:114190679 451.44