Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1784 ATGGGTGTGTTGAGCGAGGGTCTTACACAAATTCTGATACCTGTGGCTGCATTAATTGGAATTGCGTTTGCTCTGCTTCAATGGCTTTTGGTGTCAAGGGTCAGGGTCTCTGCTGCTGATCACACTGATGCAGACAACGGATATAGAAAAAGCTTGATAGGAGATGCAGAGTTGGAGAATGGTGTTCAGAGTGTAGAAGTTATCAATAAGTGTGCTGAAATCCAGCATGCCATTTCTGTTGGAGCTACTTCGTTTCTGTTTACCGAGTATAGGTACCTGACTATCTTCATGGGAGTATTTGGTGTGATTATTTTCCTCTTTCTGGGCTCTGTGAAGGGTTTTAGTACCCAAAGTGAACCTTGCACTTACAACAAAGGCAATATTTGTAAACCAGCACTTGCTAATGCCCTCTTTAGCACTGTTGCCTTCTTGCTTGGTGGTCTAACCTCTGTCCTTTCTGGCTTTCTCGGGATGAAGATTGCGACCTATGCCAATGCTAGAACAACTCTTGAAGCAAGGAAAGGAATAGGAAAGGCTTTTGTTACTGCTTTTCGGTCTGGTGCAGTGATGGGCTTTCTTCTTTCTGCAAATGGCCTGTTGGTGCTATACATCGCCATCAATTTATTCAAACTGTATTATGGAGATGACTGGGAGGGACTTTATGAGTCTATCACTGGCTATGGCCTTGGAGGTTCCTCAATGGCACTCTTTGGAAGAGTTGGAGGTGGCATATACACCAAAGCAGCTGATGTTGGTGCTGACCTCGTGGGGAAAGTTGAACACAATATCCCTGAAGATGATCCTCGCAACCCAGCTGTTATTGCAGACAACGTAGGAGACAATGTTGGAGATATCGCTGGGATGGGTTCCGACTTATTTGGGTCTTATGCAGAATCATCCTGTGCAGCTTTATTTATAGCATCCATATCATCCTTTGGAACGAATCATGACTACACAGCCATGTCATATCCTCTCATCATAAGCTCCATGGGAATTGTGGTTTGCTTGATTACTACTCTTTTTGCAACTGAtctgtttgaaataaaaaacgTGAGCCAAATAGAACCATCCTTGAAAAGACAGCTTCTTATCTCAACTATATTAATGACTGCTGGCATTGCCATAGTCAGCTTCACTGCTTTGCCATCAGAATTTACTCTCTATAACTTTGGAGCCAACGAGGTTGTCAAGAACTGGCACCTTTTCTTCTGTGTTGCAATTGGCTTATGGGCTGGACTTGTAATTGGGTACGTTACTGAGTACTACACTAGCAATGCTTACAGTCCAGTACAAGATGTAGCAGATTCCTGCAGGACTGGAGCTGCAACGAATGTGATTTTTGGTTTAGCACTGGGATATAAATCAGTCATTATTCCCATATTTGCTATTGCTGTTGCTATTTATGTAAGCTTTACCCTTGCCGCCATGTATGGAATTGCTGTTGCCGCACTTGGAATGCTCAGTACCATCGCCACAAGTCTTGCCATTGATGCTTATGGTCCAATCAGTGATAATGCTGGGGGTATTGCTGAAATGGCTGGAATGAGACATGAGATACGAGAAAGAACCGATGCTCTGGATGCTGCAGGAAACACCACAGCCGCTATAGGCAAGGGTTTTGCTATTGGATCAGCTGCACTTGTGTCTCTTGCATTGTTTGGGGCTTATGTGAGCAGAGCAGGCATCAAAACAGTGAATGCGATGACCCCAAAAGTTTTTATTGGTTTGATTGTGGGAGCAATGCTTCCCTACTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGTGCAGCTCTCAAAATGGTTGAAGAAGTTCGTAGGCAATTCAATTCTATTCCCGGTCTTATAGAAGGAAGAGCAAAACCTGATTATGCAAATTGTGTAAAGATTTCCACCGACGCCTCACTTAGGGAGATGATCCCTCCTGGTGCATTGGTTTTGCTTACACCACTTATTGCCGGAACACTCTTTGGGGTAGAGACTCTTGCTGGGGTTCTTGCTGGCTCCCTCGTTTCTGGTGTGCAGGTGGCAATTTCAGCTTCAAACACTGGTGGTGCATGGGACAACGCCAAGAAATACATAGAGGCTGGTACTACCCCACATGCTGTATCACTTGGTCCAAAAGGCTCGGATGCTCACAAAGCAGCTGTCATAGGCGACACTGTTGGAGACCCTCTGAAAGATACTTCGGGCCCCTCACTCAACATTTTGATTAAGCTCATGGCAGTTGAATCATTGGTATTTGCTCCATTCTTCGCAGCTCATGGAGgcttaatctttaaattacTCTGA 2292 0.4411 MGVLSEGLTQILIPVAALIGIAFALLQWLLVSRVRVSAADHTDADNGYRKSLIGDAELENGVQSVEVINKCAEIQHAISVGATSFLFTEYRYLTIFMGVFGVIIFLFLGSVKGFSTQSEPCTYNKGNICKPALANALFSTVAFLLGGLTSVLSGFLGMKIATYANARTTLEARKGIGKAFVTAFRSGAVMGFLLSANGLLVLYIAINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEHNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFIASISSFGTNHDYTAMSYPLIISSMGIVVCLITTLFATDLFEIKNVSQIEPSLKRQLLISTILMTAGIAIVSFTALPSEFTLYNFGANEVVKNWHLFFCVAIGLWAGLVIGYVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFTLAAMYGIAVAALGMLSTIATSLAIDAYGPISDNAGGIAEMAGMRHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAYVSRAGIKTVNAMTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLIEGRAKPDYANCVKISTDASLREMIPPGALVLLTPLIAGTLFGVETLAGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGTTPHAVSLGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKLL 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1784 763 PIRSF H+-PPtase 8 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu7g1784 763 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 3 762 - -
Ssu7g1784 763 Pfam Inorganic H+ pyrophosphatase 38 748 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu7g1784 763 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu7g1784 763 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 3 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu7g1784 763 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1784 Ssu-Chr7 36313475 36317470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1784 3 626 Primary Pumps ATPases AT1G15690 78.288 0.0 1010
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1784 K23025 - gmx:100812548 1427.54