Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1773 ATGGTATCAAATTGGCAATCTCTCGAGAGCCGTGAGGGAGATGATGGCAGAGGCCATAGAATTCCAATTATACAATCCAAACAAAGACATGGTGATCCAAAAGAAGCATCTCTTAGTGGCCTTAGAAATGTGATAAAAGGGTTGTGGACCAATGACCACGAGCTGTACTTTGAACGTTTTCTCAGAAGAGTGGTACGAGAGGAGGTGGAGCGTAAAGTTCAGGATTATCTATCTTCAAGGGCATGGGTTAATCAGACTGGCACATCTAGAGCAACACCCTTCGAGTTGCGTTTCATTAATAAATTGCCTGATATAATTTTTACCCAATCTAACATAATAGGAGAGGATAAAACACCCATTCAAATTGCTCTCTTTGATGTTAGAGATCAGTCGGTGGTTAACGTTGGTCCTCTCTCCTCTATAAAGGTAGAGATCTGTGCCCTCAATGGCGAGTTTGGCTTTAATGGAAGTGAGGATTGGACTGAAGATGATTTCAATGTCAATATCTTGCGTGAGAGAGAGGGTAAAAGGCCATTATTGAACGGAGATAGGTTTATTACTCTGAAAAATGGAGTAGGTTCTATCAATAAAGTTATGTTCACAGATAACTCGAGATGGATAAGAAGCAGAAAGTTTAGGTTGGGAGCCAAAGTTGTGCAACCAACTGCCAAGGAAGCAAACATTAAGGAAGGTAGAAGCGAACCTTTTGTGGTCAAAGATTACAGAGGAGAGaCGTACAAGAAACACTACCCTCCATCTTTGAATGACGATGTTTGGCGTTTAGAGCAAATTGCCAAAGACGGAAAAATCCACAAGCGGCTCTCTCTTCATGGAATTCACACTATTAAGGATCTCATGCGGTTATACACAACAAACCCATCTTCATTACTTGAGAAGGTTGGCAACATTCCGAAGAGGTCATGGATAGCAATTATTGAACATGCCAAGACTTGTGTGATAGATGATAACGAGACTTTCGTCTACCACTCAGCAGAACAATCGATAGGCCTGCTATTCAATTCCATCTACGTCCTTGTAGGTGTGACATTTGATGGGCAAAATTATCGTTCTCCTGATACTCTCACCCTTAATGAGAAGCATTTGGTGGAGATATTGAAGCAGAATGCTTACAGAAATACGgataatttcaaatcaattgaTGAGACATCATTGAGCTGCTTAAGACCATTGGCATGTCTAGGAGCAGGGCAGTCTGATGCAACAGAGCAAGGTCTGCAACAGTTAAATATCTCTACAGAACAAGAAGATCGTCAAGGAACATGGGCTGGTTATGGTCAACCATATGCCTCAACTTCATATATAGATGAAGGAGTAGAAAATTACCAAATCTATGTTGATTCAGTGCCAGACATAACAGATATGCCACTGAACAATCCACTGAATAATCCTTATGCCATAAATTCAATGAAGGAGTACACGAAGGAATTTTTCTCTGGATTGTGCATTGAAGGGGATAGTTCGGTCCCTTATGGATAA 1497 0.4061 MVSNWQSLESREGDDGRGHRIPIIQSKQRHGDPKEASLSGLRNVIKGLWTNDHELYFERFLRRVVREEVERKVQDYLSSRAWVNQTGTSRATPFELRFINKLPDIIFTQSNIIGEDKTPIQIALFDVRDQSVVNVGPLSSIKVEICALNGEFGFNGSEDWTEDDFNVNILREREGKRPLLNGDRFITLKNGVGSINKVMFTDNSRWIRSRKFRLGAKVVQPTAKEANIKEGRSEPFVVKDYRGETYKKHYPPSLNDDVWRLEQIAKDGKIHKRLSLHGIHTIKDLMRLYTTNPSSLLEKVGNIPKRSWIAIIEHAKTCVIDDNETFVYHSAEQSIGLLFNSIYVLVGVTFDGQNYRSPDTLTLNEKHLVEILKQNAYRNTDNFKSIDETSLSCLRPLACLGAGQSDATEQGLQQLNISTEQEDRQGTWAGYGQPYASTSYIDEGVENYQIYVDSVPDITDMPLNNPLNNPYAINSMKEYTKEFFSGLCIEGDSSVPYG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1773 498 MobiDBLite consensus disorder prediction 1 35 - -
Ssu7g1773 498 Pfam Calmodulin binding protein-like N-terminal domain 95 240 IPR046831 -
Ssu7g1773 498 PANTHER OS02G0177800 PROTEIN 1 493 IPR012416 GO:0005516
Ssu7g1773 498 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Ssu7g1773 498 Pfam Calmodulin binding protein C-terminal domain 325 385 IPR046829 -
Ssu7g1773 498 MobiDBLite consensus disorder prediction 10 35 - -
Ssu7g1773 498 PANTHER CALMODULIN-BINDING PROTEIN 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1773 Ssu-Chr7 36200198 36202966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1773 41 391 Calmodulin-binding Proteins AT5G26920 42.179 3.07e-87 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1773 - - gmx:100806598 795.038