Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1767 ATGGCGCCAGAGCTAGCCTTGCCATTCTCTGTTGTATCTGTGGTCGAAGATGTTCTTCAGAAGCATGGAAGCCGTTTAAGCGACGTTGACTTGGCATCAAGGAAGGCCGAAGAAGCTTCCTCAAGAAGGAACGAAGCAGCTGGGTGGCTACGAAAGATAGTCGGAGTTGTTGGAGGGAAAGACATGCCAGGTGAGCCTTCTGAAGAAGATTTCAGGATTACATTGCGTAGTGGCATTATCCTTTGCAATGCCCTTAACAAAATTCAACCCGGAGCAGTGCCCAagGTAGTTGAAGCGCCCTGCGATAGTGTTATTATTCCTGATGGAGCAGCTCTGTCTGCTTATCAATGCTTTGAAAATGTAAGGAATTTTCTAGTAACTATGGAGGAAATGGGGCTACCCACCTTTGAAGTTTCTGATTTGGAACAGGGAGGGAAATCTTCGAGGATAGTGAATTGTGTTTTAGCTCTCAGGTCTTACAGTGAATGGAAACTGGGAGGAAAAAATGGGTCATGGAAATATGGTGGGAATCCAAAACCACCTACCTCTGCGAAACTTATTCTGAGGAAAAACTCGGAACCATTCATGAGGTCTTTGTCAAGGAGTATTTTCTTAGGAGATAGAGATGGTTTGCTAAGTGATAATTCTCCAAAGAGTGGTGACGCGGGGCATGATATCAGTGAAGGGGGTTCTATTCCCTCCTTGAATTTACtagtttgtgaaattttatctgataagaagcaagaagaaattCCCATTGTGGTGGAGTCTCTACTTGGCAAAATCATGGAGGAGTTTGAGCAACGCTTGCTAATCCAACAAGAAACTGTGTGTATCTCTTTGTCTTCTAACCAAatggaagaagatgaagatgtagaggttaaacaaaaagaaagcgATGATGTTAAGTACAATGGTGATAGAGAATCAACTTCAAGCAGCCAGCCTGTGAAGCAGCAAAAGTTATTTCAGCAGCAAAATGAAAACGTCCAGGAGTTGAAAATGATGGTTCATCAAACAAAAACAGGAATGCAGGTTCTGCAACAGAAATACCAGGAGGATATCATCCATCTAAGTAAGCACCTGCATGGCCTAGCTTCTGCTGCTTCAGGATATCAGAAAGTTCTTGAAGAAAACCGCAAGTTATATAATCAATTGCAAGACCTGAAAGGAAATATTAGGGTGTACTGCAGAGTTCGACCCTCAATAGGTGGGCAACCAAACCTTCATTGCCCTGTCAGTAGCATAGATGAAGGAAGTATCTCACTCATAATACCTTCCAAAAACAGGAAAGAGGGGAAGAAGGCATTTAATTTCAACAGAGTGTTTGGTCCTTCAGCAACCCAAGGGGAGGTTTTCTCAGATACACAACCACTAATTCGTTCGGTTCTTGATGGCTACAATGTGTGTATATTTGCTTATGGCCAGACAGGATCAGGAAAAACGCACACTATGTCAGGACCAAACAATTATACTGAGGAAACAGTAGGTGTCAACTACCGCGCACTGAGAGATCTTTTCCTTCTCTCAGAGCAGAGGAAAGATATCATTCACTATGATATATCTGTTCAGATGTTTGAGATTTACAATGAGCAAGTCAGAGACCTATTAACGACAGACGAAATTCGCAACAGTTCCCATAATGGCATTAACGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACTTCCGATGTCTTAAATTTAATGAACTTGGGACAAAAGAACCGAGCAGTTAGTGCTACTGCCGTGAATGATCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTGCATCAGGGAATTGTCTTCGCGGTTGTATCCACTTAGTTGACCTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAGGAGGCTCAACATATTAACAAGTCACTTTCTGCTTTAGGAGATGTAATTGCTTCGCTTGCCCAAAAGCAATCACATGTTCCCTACAGGAACAGCAAACTTACTCAGCTGCTTCAAGATTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATGTTAGTCCGGAGCCTGAAGCCCTTGGAGAAACAATTAGTACATTGAAGTTCGCAGAAAGGGTCTCCACTATTGAACTTGGTGCTGCACGACTTAACAAAGATAGTGCAGAGGTCAAAGAGCTTAAAGAACAGATTGCCAGTCTGAAGGCAGCCTCGGCCAGGAAGGATGGAGAATTGGAACGCTTTCAACAGTCTGCAAATAGCATTACTGAAACTCCAAGGTTAAAATCTCAATTGTCTTTCTTGGCACTGTCACCTAGTTGGTCGTCTGGAGGTCGTAAGCCACCAAGAGATGATTCTAGAAGCATGGAGgAGAAGAAAAAGGCAACATCCAAGCTCATGAAAAGACAAAGCCTTGATCCCTCGGACATTTATAGGAGTTCACCCCGGTGGCCTCGTCATGCAGGGGTAAATGGAAAGGAGGATGATAAGGAATCGGTTTTGGGGGATTGTGTTTGTAAGAGTATGAAAAGGAATGACTGCTTAACCACTGATGACAGCCTCGTCCGACAGTGTGAAACAGGAAGCAAACAGTCGTCTTCTCCAATGCTAAGTCCCACGTTTCTTTTAGACCCTTCAAAAATATGCATGGAGGTGGCCACCACAAATGACTCCGATGAGCTTGAGTTAGCAACTAGTGAAAATTCAGAATCAGACATGAGTTGGCAATCACATGCACATGTACCAAAAGCAACCGCTCTTTCCAACGGATTAGTGTCTAAAACAAAGAAATCAGCTCATCCTAGACAAGCGAAGAAGAACCAAGAAACCAGGAGTATGATCCCGTTATTGTCTCCCTCATCATCAAGGAAACAGGTACAACTCACCGTAGTTAGTCAACAAAGAAAGCATCCGGATGCAAAGAGAAGAACTGGAAATGCCAAATGA 2952 0.4248 MAPELALPFSVVSVVEDVLQKHGSRLSDVDLASRKAEEASSRRNEAAGWLRKIVGVVGGKDMPGEPSEEDFRITLRSGIILCNALNKIQPGAVPKVVEAPCDSVIIPDGAALSAYQCFENVRNFLVTMEEMGLPTFEVSDLEQGGKSSRIVNCVLALRSYSEWKLGGKNGSWKYGGNPKPPTSAKLILRKNSEPFMRSLSRSIFLGDRDGLLSDNSPKSGDAGHDISEGGSIPSLNLLVCEILSDKKQEEIPIVVESLLGKIMEEFEQRLLIQQETVCISLSSNQMEEDEDVEVKQKESDDVKYNGDRESTSSSQPVKQQKLFQQQNENVQELKMMVHQTKTGMQVLQQKYQEDIIHLSKHLHGLASAASGYQKVLEENRKLYNQLQDLKGNIRVYCRVRPSIGGQPNLHCPVSSIDEGSISLIIPSKNRKEGKKAFNFNRVFGPSATQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNNYTEETVGVNYRALRDLFLLSEQRKDIIHYDISVQMFEIYNEQVRDLLTTDEIRNSSHNGINVPDANLVPVSSTSDVLNLMNLGQKNRAVSATAVNDRSSRSHSCLTVHVQGRELASGNCLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPEPEALGETISTLKFAERVSTIELGAARLNKDSAEVKELKEQIASLKAASARKDGELERFQQSANSITETPRLKSQLSFLALSPSWSSGGRKPPRDDSRSMEEKKKATSKLMKRQSLDPSDIYRSSPRWPRHAGVNGKEDDKESVLGDCVCKSMKRNDCLTTDDSLVRQCETGSKQSSSPMLSPTFLLDPSKICMEVATTNDSDELELATSENSESDMSWQSHAHVPKATALSNGLVSKTKKSAHPRQAKKNQETRSMIPLLSPSSSRKQVQLTVVSQQRKHPDAKRRTGNAK 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1767 983 MobiDBLite consensus disorder prediction 925 983 - -
Ssu7g1767 983 PRINTS Kinesin heavy chain signature 582 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1767 983 PRINTS Kinesin heavy chain signature 466 487 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1767 983 PRINTS Kinesin heavy chain signature 613 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1767 983 PRINTS Kinesin heavy chain signature 662 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1767 983 SUPERFAMILY Calponin-homology domain, CH-domain 34 183 IPR036872 -
Ssu7g1767 983 Coils Coil 719 746 - -
Ssu7g1767 983 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 971 - -
Ssu7g1767 983 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 971 - -
Ssu7g1767 983 MobiDBLite consensus disorder prediction 782 802 - -
Ssu7g1767 983 SMART kinesin_4 390 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1767 983 Gene3D Kinesin motor domain 334 714 IPR036961 -
Ssu7g1767 983 MobiDBLite consensus disorder prediction 943 969 - -
Ssu7g1767 983 MobiDBLite consensus disorder prediction 288 307 - -
Ssu7g1767 983 MobiDBLite consensus disorder prediction 774 832 - -
Ssu7g1767 983 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Ssu7g1767 983 SMART ch_5 42 160 IPR001715 GO:0005515
Ssu7g1767 983 Pfam Calponin homology (CH) domain 41 161 IPR001715 GO:0005515
Ssu7g1767 983 Pfam Kinesin motor domain 427 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1767 983 Gene3D - 32 162 IPR036872 -
Ssu7g1767 983 ProSiteProfiles Kinesin motor domain profile. 392 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1767 983 CDD KISc_C_terminal 390 714 - -
Ssu7g1767 983 MobiDBLite consensus disorder prediction 288 319 - -
Ssu7g1767 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 748 IPR027417 -
Ssu7g1767 983 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1767 Ssu-Chr7 36116481 36122446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1767 380 746 Calmodulin-binding Proteins AT5G65930 40.957 3.15e-74 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1767 K10406 - gmx:100808197 1495.72