Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1766 ATGAGTGGGACTGAATTATCTAATATGAAGCAACCACTTGTTCCGCTGGCAACCCTGATTGGCCGGGAGCTACGAAATGGAAAAATTGAAAAGCCTTTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGCCAGAGAGTTCCTGGGGATTCATCAACACTGTTTTCTGTCTTTGcgATCTTTGATGGGCATAATGGTATATCTGCTGCTATTTTTGCAAAGGAAAACATACTAAGTAATGTTATGAGTGCAATACCACAAGATATCAGTAGGGACGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGGTTTTGTAAAAACTGACATAGAATTTCAGAAAAAAGGGGAAACTTCTGGAACAACAGCTACATTTGTTCTGATTGATGGATGGACTGTTAGTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTTGTTTCTCTATTGACAGTAGATCACAGATTGGAAGAAAATGCAGAAGAGAGGGAACGCGTTACTGCCAGTGGTGGTGAAGTTGGAAGACTCAATGTATTTGGAGGCAATGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACAGACGTGGGAGAATTTATTGTGCCAATACCACACGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGCTGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTAGTTAAGGAAGCTCTAAGATCAAGGGGGCTTAAGGATGATACAACTTGCCTCGTTGTAGATATTATTCCTTCAGACCATCCTGTGTTACCAACAATTCCaagaaagaaacataatatgCTAACGCCCCTTCTCTTTGGAAAGAAATCTCAAAACTCTACAAACAAAGGTACCAATAAGCTTTCTGCTGTTGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTACGGAGAGGTTGGGTAAAGATTTTCCATCTAATATGAATCCTGGGATTTTCTGCTGTGCGGTTTGCCAAGCAGATCAACCCTCTGGAGATGGTTTATCAATGAACACTGGGTCTTTTTTCTCTCCAGTATCTAAGCCATGGGAAGGTCCGTTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTAGCAGACCCTCAGAGACAGCATAG 1287 0.4266 MSGTELSNMKQPLVPLATLIGRELRNGKIEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENILSNVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQKKGETSGTTATFVLIDGWTVSVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCWGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPRKKHNMLTPLLFGKKSQNSTNKGTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNMNPGIFCCAVCQADQPSGDGLSMNTGSFFSPVSKPWEGPFLCTNCQKKKDAMEGKRSSRPSETA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1766 428 SMART PP2C_SIG_2 50 297 IPR001932 -
Ssu7g1766 428 CDD PP2Cc 43 297 IPR001932 -
Ssu7g1766 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Ssu7g1766 428 PANTHER ALPHABET, ISOFORM E-RELATED 3 426 - -
Ssu7g1766 428 Pfam Protein phosphatase 2C 63 262 IPR001932 -
Ssu7g1766 428 Gene3D - 34 301 IPR036457 -
Ssu7g1766 428 SMART PP2C_4 23 295 IPR001932 -
Ssu7g1766 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 3 426 - -
Ssu7g1766 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1766 Ssu-Chr7 36086766 36088892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1766 1 427 PP2C-type Phosphatase Gene Family AT1G09160 76.581 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1766 - - gmx:100794630 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1766 7 36086766 36088892 Ssu7g1766 7 36086766 36088892 ECH
Ssu4g0417 4 6788049 6789899 Ssu7g1766 7 36086766 36088892 PCT