Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1756 ATGGCCACAAACATGAAGACATGGACCACCTTGTACACCCTTGTTTTCCTCTTCATCCTCTTCCTTTCTTCCTCTCATGCAGctttctcctcctcctcctcggATAGCACATGCGACACTACACCCTACCCAGCATTCTGCAAAACTACGCTGCCTCCTCAATATTTATCCATACATGACCAATGCCGTTTCTTCGTTCAGCAATCCTTATCAACAACAAAAACGATTTTCGGATTGATCTCTTCTTATCTCAGAAGCCACTCCACCATTCCTGATTCCACAGTACATGCCCTTGAAGATTGTCTTAGTTTTGCAGAACTGAACACTGATTTCTTGTCCAATGTCCTCCAAGCCATTGAAAACACCGTGACTAGCTATCAGGTCTATGACCTGATAACCTTGCTTAGTGCAATTTTAACCAACCAACAAACGTGCTTGGATGGTTTTAATGAGGTAACTCCCTATCCTCTAATTACCAGTGCCTTATCAACTCCTCTTTCTGATGGGATCAAACTATATAGCATATCTCTGGCCCTTTTCACCCGTGGTTGGGTTAGCGATGCCTCAGGAGGATCAACTATAGTTGAGACTATTATTAATAGAAAGTTACTACAAACAAGCATTGATAATGTGGTGGTGACACAAAAAGTGGTGGTGAACCCTGACGGGTCTGGGGATTTCACCACCATAAATGATGCAGTGACTGCTGCACCTAGCAATACCGGCACCAACAACGGGTACCATGTAATTTTTGTTGTCGCTGGGATTTACAATGAATACGTGTCTGTTCCTAAGAGCAAGGAGAACCTAATGCTCGTTGGAGATGGCATCAACCGCACTGTGCTCACCGGCAATCGCAGCGTGGTGGATGGCTGGACCACTTTCCAATCTGCGACTTTTGGTAAGCTAAGCTGA 915 0.435 MATNMKTWTTLYTLVFLFILFLSSSHAAFSSSSSDSTCDTTPYPAFCKTTLPPQYLSIHDQCRFFVQQSLSTTKTIFGLISSYLRSHSTIPDSTVHALEDCLSFAELNTDFLSNVLQAIENTVTSYQVYDLITLLSAILTNQQTCLDGFNEVTPYPLITSALSTPLSDGIKLYSISLALFTRGWVSDASGGSTIVETIINRKLLQTSIDNVVVTQKVVVNPDGSGDFTTINDAVTAAPSNTGTNNGYHVIFVVAGIYNEYVSVPKSKENLMLVGDGINRTVLTGNRSVVDGWTTFQSATFGKLS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1756 304 Pfam Pectinesterase 217 301 IPR000070 GO:0030599|GO:0042545
Ssu7g1756 304 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 182 IPR035513 -
Ssu7g1756 304 Pfam Plant invertase/pectin methylesterase inhibitor 35 179 IPR006501 GO:0004857
Ssu7g1756 304 PANTHER PECTINESTERASE 19 300 - -
Ssu7g1756 304 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 19 300 - -
Ssu7g1756 304 SUPERFAMILY Pectin lyase-like 216 300 IPR011050 -
Ssu7g1756 304 SMART PMEI_2 29 179 IPR006501 GO:0004857
Ssu7g1756 304 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 180 IPR006501 GO:0004857
Ssu7g1756 304 Gene3D - 210 303 IPR012334 -
Ssu7g1756 304 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 182 IPR035513 -
Ssu7g1756 304 CDD PMEI-like_3 38 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1756 Ssu-Chr7 35936957 35937871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1756 15 301 Carbohydrate Esterase AT4G02330 37.574 1.41e-61 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1756 K01051 - gmx:100810329 441.039