Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1752 ATGGGGCATTTTTCATCTGCGTTCAATAGGTTGGCAAATTCGTTTGCAACGAAGAAAGGGAGAAGTTCTGCTGGATGTAACGGGAGAGAAGCTGCGGAAGCAATGGCTAAGGAAgccaaaaaaaatcacttcataTTGCATAGCTCAGGCACCGTTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAAGGGCAAGAAAGGAGTGAATCAGGATTGCTGCGTTGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGCGGGATTTTTGATGGGCACGGGCAATGGGGTCACTATGTGGCCAAAACAGTACGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTACACTTGATCCAGATGTTGATGGTGATATAGAGACAGAGAAAAAGCAACACCGGTTTAATATATGGAAGCATTCCTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTGAAGCAGAATCGCAAGATAGATTCATTTTCAGCGGAACAACTGCCTTGTCAATTGTTAGGCAGGGTGAACTCGTTGTCATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAG 606 0.4389 MGHFSSAFNRLANSFATKKGRSSAGCNGREAAEAMAKEAKKNHFILHSSGTVNVDGSNNFASVFSKKGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGQWGHYVAKTVRESMPPSLLCNWQETLSQTTLDPDVDGDIETEKKQHRFNIWKHSYLKTCAAIDRELKQNRKIDSFSAEQLPCQLLGRVNSLSLQTLVTLVLC 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1752 201 PANTHER ALPHABET, ISOFORM E-RELATED 1 176 - -
Ssu7g1752 201 SUPERFAMILY PP2C-like 58 167 IPR036457 -
Ssu7g1752 201 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 176 - -
Ssu7g1752 201 Gene3D - 47 200 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1752 Ssu-Chr7 35904003 35905069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1752 1 174 PP2C-type Phosphatase Gene Family AT5G27930 66.857 1.44e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1752 - - gmx:100793051 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0412 4 6710976 6713057 Ssu7g1752 7 35904003 35905069 PCT
Ssu9g1363 9 48112080 48113330 Ssu7g1752 7 35904003 35905069 PCT