Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1751 ATGACGGAAAGGGAAGAAAAACCGAAACCTCTGACAAAAACGATAAAACCCGCTACACCGTTGTCTTTGCTTCATTTAACAAAGTACCGTGCTCTCAACTCAACTCGTGAAGTAGCAGTCTCCGACATTCCCATGTCGTCTGAGCCGCTGATTCCACCGTCGGATGCATTGTCAGCATCTCACTCCTTCCGGCGATGCGGCGAACCGGCGTGGATTTTCGAAGAATTACCGAAGGCCACCATCGTCTCCGTGTCGAGACCAGAGACCGGAGACATTAGCCCAATCCTCCTTTCTTATACCATTGAGTTGCAGTATAAACAGTTCAAGTGGCGTCTACTGAAGAGAGCATCACAAGTTCTCTATTTACAGTTTGCTTTGCGGAAACGTGCAATAATTGAAGATTTTCATGACAAGCAAGAGCAGGTAAAAGAATGGCTTCAATACTTAGGAATAGTAGATCAAACGGTAATGGAGCAAGATGATGAAGAACCTGATGATGGACCTGTGCCTTTACATCATGAAGACAGTGTTAAAAAcagATATGTTCCATCCGTTGCTGCTCTATCAATAATTCGTCCATCACTAGGAGGGCAGCAGTCAATTGCAGATAGAGCCAAAGTCACAATGCAGGGTTATTTGAATCATTTTTTAGGAAACCTGGATATTGTGAATTCTCAAGAGGTCTGCAAGTTTTTGGAAGTCTCCAAGCTATCCTTTTTACAGGAGTATGGTCCAAAACTAAAAGAAGGATATGTAATGGTGAATCATTTGTCAAATATTTCACAGGATTCGGATGTATCATGCTTCCCATGCAATTGGTTTCATTGCTGTGATAACAACCAGAAGAAGGTATGGGCTGTTTTGAAACCTGGGTTTTTGGCCTTCCTGGATGATCCCTTCAACAACAAACCACtggatataattatttttgatatccTCCCTTCCTCAAATGGAGAgaccaaaatatatttagctGATCCTATAAAAGAACGCAATCCTTTGCGTTACACATTCAAGgtTTCTAGTGGAAATAGGAGCATATTGTTGAGAACTACCAGCAGTGCTAAAGTAAAAGCTTGGGTTACTGCAATTAATGAAGCTAGTCTAAGACCTCTTGAGGGTTGGTGTTGTCCTCATCGCTTTGGTTCCTTTGCTCCCATAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAATGGTTTGTAGACGGACAGGCAGCATTTGAAGCAATTGCTACTTCAATTCAAGATGCAAAGTCAGAGATCTTCATTACGGGTTGGTGGCTGTGCCCAGAGCTATATCTGAGACGGCCTTTTCATAGTTTTTCTACCTCTCAGTTAGATTCATTACTAGAAGAAAAGGCTAAGCAAGGGGTTCAGATCTATGTGCTTCTCTACAAGGAGGTTTCTCTAGCTTTGAAAATCAACAGCTTGTACAGTATGAGAAGACTGCTCAAAATTCATGAGAATGTGAGGGTACTGCGCTATCCCGATCATTTCGCCGCTCGTGTGTATTTATGGTCGCACCATGAAAAACTTGTAATTATTGATTACAAGATTTGCTATATTGGAGGATTAGATTTATGCTTTGGTCGATATGACACACCTGAACATGAAGTGGGTGACTGCCCTTCTGTAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAGCCAAATTCATGGGAAGACACCATGAGAGATGAATTGGATCGCAAGAAATATCCCCGTATGCCATGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCGAAGAGAACTAAAGCTCCAAATGAGCATGCAATTCCACTACTTATGCCTCACCATCACATGGTCATCCCTCATTACATGGGAAGAAGCAAAGAGATAGACATTgatgaaaagaaagatgaagaCAAGAGGAAAGAAATTGACATTCAGGATTCATTTTTCTCTGAGTCTCCAATGCAAGATATACCACTACTTATACCTCAAGAAGCTGATGGACCAGTTACTTCAAATGGAGATCATACAAATTTAAGTGAAAATTCTCCGTTATTGTCCCAAAAGCTGGGGCATGAAACTTTAGTTTCAGACTCCCATATGAAAGGGTTTCAAGATGAAGTTGTTCCTTTAAACTTGGGGGCACAATCTGTTGTCGATACTCTAGATGATTGGTGGGAAACACCAGAAGGCACAAATGATGACACTACTTTGGAATATGGACAAGTTGGTCCACATACTACCTGTCACTGTCAGGTAATCAGAAGTGTCAGCCAGTGGTCTGCTGGAACAAGTCAGCCTGAAGAAAGCATTCACACTGCATATTGTTCTCTTATTGAAAAAGCAAAGCATTTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTAGCAGGGGATGACATAATACAGAACCGTATTTTGGAAGCACTATACAGGCGTATTTTGCAAGCCCACAAAGAACAGAAAGATTTTAGAGTTATAATTGTGATGCCTCTCTTGCCTGGCTTCCAGGGTGGTCTGGATGATGGTGGTGCTGCTACTGTGAGAGCCTTAACACATTGGCAGTATAGAACGATTTCTAAAGAACAGCACTCCATATTACACAATCTTGAAGCTAAACTTGGTCCTAAGACACATGATTATATTTCTTTCTATGGTCTAAGATCTCATGGTAGACTTTATGAAAATGGCCCTGTGGCTACAAGTCAGGTATATGTGCACAGTAAATTGATGATAATTGATGACCGTGTAGCTTTTATTGGATCATCTAATATAAATGACCGCAGTTTGCTTGGATTAAGAGACTCTGAGATCGGAGTGCTTATAGAAGACAAAGAATATGTTGAATCATTGATGAATGGAAAGCTATGGAAGGCTGGGAAATTTTCCTATAGCCTCCGCTGCTCCCTATGGTCTGAGCACCTTGGTCTTCATACTGGAGAGATCAGTAAAATCAGTGATCCGGTGGCAGATACAACCTACAAGGACTTGTGGTCAGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTCTTTGCTTGCATTCCCAACGATCAGATACACTCAAGAGCTGCACTTCGGCAAAGCATGGTTCAATGGAAAGAAAAACTTGGTCATACCACCATAGATTTGGGAATAGCCCCTGATAAGTTAGTCTGTCATGAGAAtggagaaataaaaacaatagacCCGATAGAGAGGTTGAAGTCTGTGAAGGGACATCTTGTTTCCTTTCCTTTGGAGTTCATGCGTGAGGAAGATCTAAGACCAGCTGTTATTGAGAGCGAGTTTTATGTTTCTCCTCAAGTATATCATTAA 3354 0.4091 MTEREEKPKPLTKTIKPATPLSLLHLTKYRALNSTREVAVSDIPMSSEPLIPPSDALSASHSFRRCGEPAWIFEELPKATIVSVSRPETGDISPILLSYTIELQYKQFKWRLLKRASQVLYLQFALRKRAIIEDFHDKQEQVKEWLQYLGIVDQTVMEQDDEEPDDGPVPLHHEDSVKNRYVPSVAALSIIRPSLGGQQSIADRAKVTMQGYLNHFLGNLDIVNSQEVCKFLEVSKLSFLQEYGPKLKEGYVMVNHLSNISQDSDVSCFPCNWFHCCDNNQKKVWAVLKPGFLAFLDDPFNNKPLDIIIFDILPSSNGETKIYLADPIKERNPLRYTFKVSSGNRSILLRTTSSAKVKAWVTAINEASLRPLEGWCCPHRFGSFAPIRGLTEDGSQAQWFVDGQAAFEAIATSIQDAKSEIFITGWWLCPELYLRRPFHSFSTSQLDSLLEEKAKQGVQIYVLLYKEVSLALKINSLYSMRRLLKIHENVRVLRYPDHFAARVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPEHEVGDCPSVIWPGKDYYNPRESEPNSWEDTMRDELDRKKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEHAIPLLMPHHHMVIPHYMGRSKEIDIDEKKDEDKRKEIDIQDSFFSESPMQDIPLLIPQEADGPVTSNGDHTNLSENSPLLSQKLGHETLVSDSHMKGFQDEVVPLNLGAQSVVDTLDDWWETPEGTNDDTTLEYGQVGPHTTCHCQVIRSVSQWSAGTSQPEESIHTAYCSLIEKAKHFIYIENQFFISGLAGDDIIQNRILEALYRRILQAHKEQKDFRVIIVMPLLPGFQGGLDDGGAATVRALTHWQYRTISKEQHSILHNLEAKLGPKTHDYISFYGLRSHGRLYENGPVATSQVYVHSKLMIIDDRVAFIGSSNINDRSLLGLRDSEIGVLIEDKEYVESLMNGKLWKAGKFSYSLRCSLWSEHLGLHTGEISKISDPVADTTYKDLWSATAKENTRIYHEVFACIPNDQIHSRAALRQSMVQWKEKLGHTTIDLGIAPDKLVCHENGEIKTIDPIERLKSVKGHLVSFPLEFMREEDLRPAVIESEFYVSPQVYH 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1751 1117 Gene3D Endonuclease Chain A 735 979 - -
Ssu7g1751 1117 PANTHER PHOSPHOLIPASE D 62 1114 IPR015679 -
Ssu7g1751 1117 PIRSF PLD_euk 78 637 IPR016555 GO:0004630|GO:0006654|GO:0048017
Ssu7g1751 1117 PIRSF PLD_euk 624 1117 IPR016555 GO:0004630|GO:0006654|GO:0048017
Ssu7g1751 1117 Pfam Phospholipase D Active site motif 504 531 IPR001736 GO:0003824
Ssu7g1751 1117 Gene3D Endonuclease Chain A 390 627 - -
Ssu7g1751 1117 ProSiteProfiles PH domain profile. 245 369 IPR001849 -
Ssu7g1751 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 913 940 IPR001736 GO:0003824
Ssu7g1751 1117 CDD PH_PLD 223 367 - -
Ssu7g1751 1117 SUPERFAMILY PH domain-like 278 372 - -
Ssu7g1751 1117 SMART pld_4 913 940 IPR001736 GO:0003824
Ssu7g1751 1117 SMART pld_4 504 531 IPR001736 GO:0003824
Ssu7g1751 1117 SUPERFAMILY Phospholipase D/nuclease 751 963 - -
Ssu7g1751 1117 CDD PLDc_vPLD1_2_yPLD_like_1 397 542 - -
Ssu7g1751 1117 MobiDBLite consensus disorder prediction 674 693 - -
Ssu7g1751 1117 Gene3D - 246 370 IPR011993 -
Ssu7g1751 1117 SUPERFAMILY Phospholipase D/nuclease 358 624 - -
Ssu7g1751 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 504 531 IPR001736 GO:0003824
Ssu7g1751 1117 Pfam PLD-like domain 786 960 IPR025202 -
Ssu7g1751 1117 SMART PH_update 246 371 IPR001849 -
Ssu7g1751 1117 CDD PLDc_vPLD1_2_yPLD_like_2 773 957 - -
Ssu7g1751 1117 PANTHER PHOSPHOLIPASE D ZETA 2 62 1114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1751 Ssu-Chr7 35867885 35877989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1751 72 1117 Phospholipase D Gene Family (Wang group) AT3G05630 65.595 0.0 1396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1751 K01115 - gmx:100796914 2023.82