Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1746 ATGGCCACAAACATGAAGACATGGACCACCTTGTACACCCTTGTTTTCCTCTTCATCCTCTTCCTTTCTTCCTCTCATGCAGCTTTCTCCTCCTCCTCGGATAGCACATGCGACACTACACCCTACCCAGCATTCTGCAAAACTACGCTGCCTCCTCAATATTTATCCATACATGACCAATGCCGTTTCTTCGTTCAGCAATCCTTATCAACAACAAAAACGATTTTCGGATTGATCTCTTCTTATCTCAGAAGCCACTCCACCATTCCTGATTCCACAGTACATGCCCTTGAAGATTGTCTTAGTTTTGCAGAACTGAACACTGATTTCTTGTCCAATGTCCTCCAAGCCATTGAAAACACCGTGACTAGCTATCAGGTCTATGACCTGATAACCTTGCTTAGTGCAATTTTAACCAACCAACAAACGTGCTTGGATGGTTTTAATGAGGTAACTCCCTATCCTCTAATTACCAGTGCCTTATCAACTCCTCTTTCTGATGGGATCAAACTATATAGCATATCTCTGGCCCTTTTCACCCGTGGTTGGGTTAGCGATGCCTCAGGAGGATCAACTATAGTTGAGACTATTATTAATAGAAAGTTACTACAAACAAGCATTGATAATGTGGTGGTGACACAAAAAGTGGTGGTGAACCCTGACGGGTCTGGGGATTTCACCACCATAAATGATGCAGTGACTGCTGCACCTAGCAATACCGGCACCAACAACGGGTACCATGTAATTTTTGTTGTCGCTGGGATTTACAATGAATACGTGTCTGTTCCTAAGAGCAAGGAGAACCTAATGCTCGTTGGAGATGGCATCAACCGCACTGTGCTCACCGGCAATCGCAGCGTGGTGGATGGCTGGACCACTTTCCAATCTGCGACTTTTGGTAAGCTAAGCTGA 912 0.4485 MATNMKTWTTLYTLVFLFILFLSSSHAAFSSSSDSTCDTTPYPAFCKTTLPPQYLSIHDQCRFFVQQSLSTTKTIFGLISSYLRSHSTIPDSTVHALEDCLSFAELNTDFLSNVLQAIENTVTSYQVYDLITLLSAILTNQQTCLDGFNEVTPYPLITSALSTPLSDGIKLYSISLALFTRGWVSDASGGSTIVETIINRKLLQTSIDNVVVTQKVVVNPDGSGDFTTINDAVTAAPSNTGTNNGYHVIFVVAGIYNEYVSVPKSKENLMLVGDGINRTVLTGNRSVVDGWTTFQSATFGKLS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1746 303 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 181 IPR035513 -
Ssu7g1746 303 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 181 IPR035513 -
Ssu7g1746 303 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 179 IPR006501 GO:0004857
Ssu7g1746 303 Pfam Plant invertase/pectin methylesterase inhibitor 34 178 IPR006501 GO:0004857
Ssu7g1746 303 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 17 299 - -
Ssu7g1746 303 PANTHER PECTINESTERASE 17 299 - -
Ssu7g1746 303 SMART PMEI_2 28 178 IPR006501 GO:0004857
Ssu7g1746 303 CDD PMEI-like_3 41 183 - -
Ssu7g1746 303 Gene3D - 209 302 IPR012334 -
Ssu7g1746 303 Pfam Pectinesterase 216 300 IPR000070 GO:0030599|GO:0042545
Ssu7g1746 303 SUPERFAMILY Pectin lyase-like 215 299 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1746 Ssu-Chr7 35824703 35825614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1746 14 300 Carbohydrate Esterase AT4G02330 37.798 2.82e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1746 K01051 - gmx:100810329 445.277