Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1744 ATGGGGATCGATCTCAAGGCCGGAGGTAAGAGCAAAAAGACCAAAAGAACAGCACCGAAGTCCAATGATATCTATCTCAAGCTCTTGGTTAAGCTTTATCGCTTCCTTGTTCGGAGGACTAACAGCAATTTCAATGCTGTTATACTCAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCCCCACTGTCTTTATCAAGGTTGATTAAGTTTATGAAGGGAAAGgAAGATAAGATTGCTGTGGTTGTGGGGACTATAACTGATGATATTCGTGTTCATGAAGTTCCATCCTTGAAAGTTACAGCACTCAGATTTACAGAGACTGCACGGGCAAGAATAGAAAAAGCAGGTGGTGAATGCTTGACATTTGATCAGTTGGCTCTTAGGGCCCCTCTGGGACAGAACACGGTCCATCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTGAAGCATTTTGGTCCTGCTCCTGGTGTGCCTCACAGCCACACCAAGCCCTATGTTAGATCAAAGGGAAGGAAGTTCGAGAGGGCTAGAGGAAAGAGGAACAGCCGAGGATTTAGGGTTTGA 564 0.4557 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTNSNFNAVILKRLFMSKVNKPPLSLSRLIKFMKGKEDKIAVVVGTITDDIRVHEVPSLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVHLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1744 187 Gene3D - 1 187 - -
Ssu7g1744 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Ssu7g1744 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Ssu7g1744 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 138 IPR036227 -
Ssu7g1744 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1744 Ssu-Chr7 35809407 35811625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1744 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.419 1.68e-103 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1744 K02883 - gmx:100499789 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0401 4 6458408 6459480 Ssu7g1744 7 35809407 35811625 PCT