Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1731 atgggtTGTGGTTCTGAGCATTTTACCATGATCTTCATCATCACCCTCTTGATGCTCCTATCATCACAAAGCACCCACATTTTCAATGTGTTCAATGCAGTGGAAAGTTTCCAAGTTCATGGCCTACCGGAGATGTATTTCATTGGAGAGAATAATGAAAAGCAGATTAAGAAAATCTCAGGACTGGATGAGGATGAAGAGAAGCAAGCTTTGATAGTGGAGAAGTTTAGATCCTTGCTTGGACTCGAGAGTTTCCACAACAAAGTACCATCCCATGGTGATTTGGagtttctctctccctctccttcTCCGTCACCCAACCTTGAAGAAGCTCAGGCTCCagctccttctccttctccagTTCCACACGTGCACCCTCATTCACACCATCCACGACATCATAAAAATCCACCACTTCACACAACTCATCATGAAGATAGAGGCAGAGCTAAAAGAATACTAATAGCGGTTCTTGTATCTGCGGGGGTTGCTACATTGATTGGTGCTTGTGGGTTATTCTTGGTGTGGAGGAAATTCTCAAATCACACAAAGAAACCCAAAAGGGCAATGCCGCTATGTGGcaagaagaaaggaagtgaAGGTGCTTATCAAAGTTCATCAAGCAAGGTGAGTTTAAACTCAGGACTAGATCTGTTTTATCTTAATGCTTTAGGCGAGGACATAGAGCAACACGCTTGCAGCTTGAAAAAAACTAGCAAGGATGGTTTAGAACATGATAGTGTTAGCGGTTCTTACCCGAAGGAAATTGCATCTGTTCATGAAGGTGCGGAATCAGTGAAAGGTGAAGCTGAATCTGATGGCGGCAACTCTTCTTCCGGGGATAAAATTATCCCTGAAGATTGCCATTCATCAGACAATGAAAGTTTTCATTCCTTTGTTGATGATTCACACTCAAATAATAATAGACTTTCTAATGCTTCAGCTGGTAGTCTTAGTGACACAATTTCTCTATCCCCTCATAATTCTAGTTCATTAGCAAACCAGTTTCCTAGCTCTCCACCACGTAACCCAATCTCAAATATACAATCTCACCAATCACCAAATAGTCCTAAAGATGAAGAGCAAGAGACTGAGACCTCTGTCCAATGTCCAAAAACATTCACTTCccctccacctcctcctccacctccaccaccacctccaccatTGCAAATGCCATTATTTTCTTTGCATTCTCTCACTTCTTCATCTAGAGTCTCCTCTCATTCCCCTCTTTCTTTGAcatctaataatttatcatctccAATAAATTCAGACACTTTCTCAGGCTCAAATCAAAGTCCAGAAAAAGAGTTGCCTTCTCCACCTGGACCTTACCCTACACAATCTCCTCCCAACGTTCCCCCACCACCATGCCCCCCTCCATTTCTTAAAGGCAATAGTCACAGTGTCAAAACCCCACCTCCTCCACCAGCTCAACTCCCTCAATTCACCCCACTTGGTAAAGATGGTGCACCATTGCCAAAACTCAAACCGCTTCACTGGGACAAAGTAAGAGCTGCACCAAATCGCACAATGGTTTGGGATAAGCTACGATCAAGCTCGTTCGAGTTGGATGAGGAAATGATCGAATCTCTTTTTGGTTACAATTTgcaaaattcaattaagaatGACGAAACAAAGAGTAAAACCCCGTCTCCAAGCAAgcatgtacttgagccaaaacGCCTGCAGAACATTACAATACTCTCAAAAGCTCTGAATGCGACAGCTGAGCATGTCTGCGAGGCCTTAATGCAAGGGAAGGGGTTGTCTTTGCCGCAACTAGAGGCACTAGTGAAAATGGTACCTACGAAGGAAGAAGAGTCCAAGCTCTTCAATTATAAAGGTGACACCAATGAATTGGGGTCTGCCGAAAGGTTTGTGAGGGCAATGCTTGACGTGCCATTTGCCTTTCAAAGGGTTGAAGGCATGCTTTTCAGAGAGACATTTGACGATGAAGTAGTTCACCTCAGGAACTCATTTTCAATGCTTGAGGAAGCATGCAAGGAACTAAGATCAAGCAGGCTGTTCTTGAAGTTACTAGAAGCAGTGCTAAAAACGGGAAACCGTATGAACGTTGGAACAATCAGAGGAGGTGCTAGAGCATTTAAACTCGATGCCCTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGGAAAACCACGTTGCTCCATTTCGTTGTTCAGGAGATTGTTCGCTCGGAAGGAATACGAGTTTCAGATAGCATTATGGGGAAAATCAGCCAGAGAAGTAAGAACAGAACggaggaagagaaggaagaagaCTACAAAAGGATGGGACTAGAACTGGTTTCTGGTCTCAGCACCGAGTTATACAACGTGAAGAAAACAGCTACCATTGACTTGGACGTGCTTGCAAGTTCTGTGTCGAACCTATCAGAAGGAATGGCTAAGCTGCAACATCTAGTGGAGAAGGAGTTGCATAAGGATGAGAGAAGCATGAACTTCGTGCACTCTATGAAGTCATTCCTGAACTATGCTGATGGAAAATTGAAGGAGTTGCGAGGAGATGAAGATAGAGTCTTGGCCCGTGTGAAAGAAATTACCGAGTATTTTCATGGGGATGTGAGCAAAGAAGATGCAAACCCACTTAGGATATTTGTGATTGTGAGAGATTTTCTGGGGATGTTGGATAATGTGTGTAAAGAACTTAGAAGGTCTAAAGCTCCTCGGAGCTCAAACCCTCTTGCTATGCTCCCTTTAGATAGATCATAG 2739 0.4042 MGCGSEHFTMIFIITLLMLLSSQSTHIFNVFNAVESFQVHGLPEMYFIGENNEKQIKKISGLDEDEEKQALIVEKFRSLLGLESFHNKVPSHGDLEFLSPSPSPSPNLEEAQAPAPSPSPVPHVHPHSHHPRHHKNPPLHTTHHEDRGRAKRILIAVLVSAGVATLIGACGLFLVWRKFSNHTKKPKRAMPLCGKKKGSEGAYQSSSSKVSLNSGLDLFYLNALGEDIEQHACSLKKTSKDGLEHDSVSGSYPKEIASVHEGAESVKGEAESDGGNSSSGDKIIPEDCHSSDNESFHSFVDDSHSNNNRLSNASAGSLSDTISLSPHNSSSLANQFPSSPPRNPISNIQSHQSPNSPKDEEQETETSVQCPKTFTSPPPPPPPPPPPPPLQMPLFSLHSLTSSSRVSSHSPLSLTSNNLSSPINSDTFSGSNQSPEKELPSPPGPYPTQSPPNVPPPPCPPPFLKGNSHSVKTPPPPPAQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKSKTPSPSKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDTNELGSAERFVRAMLDVPFAFQRVEGMLFRETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMAKLQHLVEKELHKDERSMNFVHSMKSFLNYADGKLKELRGDEDRVLARVKEITEYFHGDVSKEDANPLRIFVIVRDFLGMLDNVCKELRRSKAPRSSNPLAMLPLDRS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1731 912 PANTHER FORMIN-LIKE PROTEIN 7 302 - -
Ssu7g1731 912 PANTHER FORMIN-LIKE PROTEIN 376 906 - -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 438 464 - -
Ssu7g1731 912 SMART it6_source 487 900 IPR015425 -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 300 355 - -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 373 393 - -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 395 437 - -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 93 147 - -
Ssu7g1731 912 SUPERFAMILY Formin homology 2 domain (FH2 domain) 500 896 - -
Ssu7g1731 912 Pfam Formin Homology 2 Domain 491 885 IPR015425 -
Ssu7g1731 912 ProSiteProfiles Formin homology-2 (FH2) domain profile. 487 911 IPR015425 -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 285 299 - -
Ssu7g1731 912 PANTHER FORMIN-RELATED 7 302 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ssu7g1731 912 PANTHER FORMIN-RELATED 376 906 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ssu7g1731 912 MobiDBLite consensus disorder prediction 107 124 - -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 186 208 - -
Ssu7g1731 912 Gene3D Formin, FH2 domain 510 902 IPR042201 -
Ssu7g1731 912 MobiDBLite consensus disorder prediction 260 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1731 Ssu-Chr7 35598991 35602486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1731 7 905 FH2 protein (formin) Gene Family AT3G05470 47.436 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1731 - - gmx:100811929 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1731 7 35598991 35602486 Ssu7g1731 7 35598991 35602486 ECH
Ssu4g0385 4 6215826 6218990 Ssu7g1731 7 35598991 35602486 PCT