Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1722 ATGAAGGGTGATCCCCTCTCTGGCCATCGTTTACTGTATGTAAGCTTTTTCGAGATTCTTATCGCACCCAACACAACTGTCTCCATTTCAACACTAACCGactccgccgccgccgccgctgCAACCTCAATTTCCGAGCAATTACACCGCAACAACCACCCTCACACATTCAACTCACTCGCAATTCAATTCCTCTCTCGGCGACCCTCTTCCACCACGGTAAATAGGGTTTGTTTTCGCTCCCTCTCAGCTAGGGTTCCTCTTCAGATGGATCACGCGCGATCGGCGAACGGCGAGGAGAATGCGGGAATCCCCGACGACTTGCGGTGCAAGAGGTCCGACGGGAAGCAGTGGCGGTGCACGGCGATGTCGATGCCGGACAAGACGGTGTGCGAGAAGCACTACATCCAGGCGAAGAAGCGGGCGGCGAATTCCGCAATGAGGGCGAACCTCAAGAAGGCCAAGCGGAAGTCGCAGTCGCAGTCGCTGGGCGAGTCTGACAACATTTATTTGGAGAGCAAGAGCGACGATTTCGACGTTCCTCTCTCCACCATAAGCCACTCTCAGAAGAAGCTCTCCAAGAACCACTTTCGTTACACGCCCGAGCGCGACGCGAGAAGGGCCTCCTCCGCGAGACGCGCTCCCAACAACAACGATGATGACGTGGATGCTGATGTGGATGCGCCTCTCTATGAAGAGGACAATTGGGTCAACTATGATTCCCCGCCGGACTCGTCGCGCAAACGATCGCGGAGGAGCTTGGATGCTAATGCCACCACTGTGAGTTGA 789 0.5361 MKGDPLSGHRLLYVSFFEILIAPNTTVSISTLTDSAAAAAATSISEQLHRNNHPHTFNSLAIQFLSRRPSSTTVNRVCFRSLSARVPLQMDHARSANGEENAGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKAKRKSQSQSLGESDNIYLESKSDDFDVPLSTISHSQKKLSKNHFRYTPERDARRASSARRAPNNNDDDVDADVDAPLYEEDNWVNYDSPPDSSRKRSRRSLDANATTVS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1722 262 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 97 259 IPR045109 GO:0032454|GO:0033169
Ssu7g1722 262 MobiDBLite consensus disorder prediction 146 168 - -
Ssu7g1722 262 MobiDBLite consensus disorder prediction 187 262 - -
Ssu7g1722 262 PANTHER JMJC DOMAIN PROTEIN JMJ24 97 259 - -
Ssu7g1722 262 Pfam WRC 105 145 IPR014977 -
Ssu7g1722 262 ProSiteProfiles WRC domain profile. 104 148 IPR014977 -
Ssu7g1722 262 MobiDBLite consensus disorder prediction 195 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1722 105 145 GRF Transcription Factor Family AT3G13960 46.341 1.85e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1722 K15601 - gmx:100792166 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1722 7 35542258 35543046 Ssu7g1722 7 35542258 35543046 ECH