Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1715 ATGGCTGATTTTTTGACTTCTACCCACCGAGCCAAGTGGATTTTCTCTCCTCAACTGCTGGTTCAGAAATATGGAGCTGCTAATCGGAGAGCCAAACAAATTCTAGAGAAGcgtGGAGCAACTCTAATGGAAGTAGATGTTGATGGGTCGTTGTCATATCCTGAATCCCAGATGACTGCAAAGGACAGTGCTGAAAAGCATTCTCAGACAAAACCTCTTAGTATTGAAGAAGAACAATGTATAAGGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAATTTCCGCTTCCCTCATAAGATCCAGGCAACAGCCCTCatctattttaaaagattcTATCTGCAATGGTCGGTGATGGAACATCAACCAAAACATATCATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCAGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATGATTCTTAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATTGTTTATGCACCATATCGCTCACTTGAAGGTTTTATCAATGATATGGAGGAATTCTGCAATGCTGGTGATAATCAGCTTGAAATGCTCAAGACTTTGCTAGAGACAGCAAGATTTGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTTTGCGCAACTCAAATGAACTCCATAACGTCATTGACTTTCATAGTTATCTTGGGAGCATTGTTTCCCGCCAGAATTCCATGCATAAAATGTCCGAGCTTTCTAAATCACTGAATGCAATTGATTCTTGGgttagaaaatacaaaagtccTTCTGACAAGGAATTGAAGCATATCAACCGAAAACTAAAGTCTTGTTGGGGCCTTAGCTCTCATGACGAGGGTAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAAGAGCTCAAATGAAGCACAAAATATGCCATCTCTTGTCTAG 1008 0.3859 MADFLTSTHRAKWIFSPQLLVQKYGAANRRAKQILEKRGATLMEVDVDGSLSYPESQMTAKDSAEKHSQTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSLEGFINDMEEFCNAGDNQLEMLKTLLETARFEVDKMMLTDAPLLFPPGQLALAALRNSNELHNVIDFHSYLGSIVSRQNSMHKMSELSKSLNAIDSWVRKYKSPSDKELKHINRKLKSCWGLSSHDEGKKREKKSKHKSKKSSNEAQNMPSLV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1715 335 PANTHER CYCLIN-H 1 330 - -
Ssu7g1715 335 SMART cyclin_7 87 168 IPR013763 -
Ssu7g1715 335 CDD CYCLIN 82 148 IPR013763 -
Ssu7g1715 335 Gene3D - 63 175 - -
Ssu7g1715 335 PANTHER CYCLIN 1 330 IPR043198 GO:0006357|GO:0016538
Ssu7g1715 335 SUPERFAMILY Cyclin-like 179 304 IPR036915 -
Ssu7g1715 335 Pfam Cyclin, N-terminal domain 79 174 IPR006671 -
Ssu7g1715 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Ssu7g1715 335 Pfam Cyclin C-terminal domain 179 280 IPR031658 -
Ssu7g1715 335 Gene3D - 177 282 - -
Ssu7g1715 335 MobiDBLite consensus disorder prediction 304 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1715 Ssu-Chr7 35399850 35404437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1715 1 280 Core Cell Cycle Gene Families AT5G27620 65.000 6.20e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1715 K06634 - gmx:547736 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1715 7 35399850 35404437 Ssu7g1715 7 35399850 35404437 ECH