Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1710 ATGACGACTGGACTTGGATGTATCGAAGGAACAAAGTGGAGTACCTACACGGCTCAGCGGGAATCGGGTAAACCCTACAAGCGACATAAGGGATCAATGGCACCAACAAGGAAATCTAGAAGTGTGAACAAGCGGATTTCAAGTTCAGATGACATTTCTCCTGAGAAAGATGGagttaattcaaataaaaacaagCAACGGAAGAAGAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTAGAGCGATTTTATGAAGCATATAGGAAGTATGGGAGAGACTGGAAGAAGGTAGCTGCTGTTGTACATAATAGATCCACTGAAATGGTAGAAGCTCTTTACAACATGAATCGGGCATACCTCTCTCTGCCAGAGGGGACGGCTTCTGTTGTTGGCCTCATAGCAATGATGATAGATCACTACAATGTGCTGGAAGGGAGTGATAGTGAAAGGGAAAGCAATGATGCACCAGGATCTCGAAAACCTGTAAAACGAAAGCGTGAAAAAGTTCAGCTTAGTGTCACTAAAGATCCAGTCCAGTCTCAGTCAATTTCTTCCAGTGATGGTTGCCTTTCTCTATTGAAGAAGGGACGCATTGATGGTATCCGGCCTCATGCTGTTGGGAAAAGGACTCCTCGCGTCCCAGTTTCCTATTCTTATAAGAAAGATGATACAGAAAATTATGTTTCGCCTTATAGAAGAAGCCTGAAGTCAACTGTTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTAACATTAACTGAGGCTGCACAAAGAGGAGGCTCTCCCCAAGTTTCTAAAACACCATATAGAAGAGTAGAGCAAAAATCCTCTCCCGTCCTGAGCTGCGAAAGAAAGCACCAAAAGTCAGAGACAGCTCGTGCCAAGTTTCATGATGTTTCTGTGGATGAAGAGTTCTTGGAAGGTAGTATAGAAAGCAGGGGAGCTGAAAATGGAGAATATGCAAGAGATAATAGTTCATTGATGGATATGGAAGGTGTAGGTGCTGTTGAAGTTCTTCAGAAGGGGCAAAAAATTTACAGAAAGAGAGAGCGAGTGGAAAATGTTGGAAACCATCAGCTTGATGATGGTGGGGAAGCATGTAGTGGCACTGAAGAAGGACTTAGTTTTAGTTCACTAAAGGAAAAGGTTGATATTGAGGTTACTAATGGAAAACTTGAACAATTCTCTCCAAAAAGTCAGaggaaaagaaacaagaaactcTTCTTTGGAGATGAAACCACTGCGTTGAATGCTTTGCAAACTTTGGCAGATCTTTCTCTAATGATGCCAACTTCAACAATAGAATCTGAATCATCTATCCAGTTGAAGGGAGAAAGAATGGCTGCTGATAAAGATGATAAGCCTGCTTTACCTGAAGCAACATCAACAGGCCATAAGAGACATAAAGTTAAACACTGTGTGGTCCCCAAAATTGAGGTTTCAACCTCCAAAAAGTCTAAGCCTGGAAAGGAATCGGCAAAGGATACTAATGCTCTCTCTGAATCAAAAGAGCAGCTTCCATTTGCTGATACAACATGGAAAAGAAAGCGAAAGTCTACGGTTTCAAAgGTTGCAAATGCAAAGTTTGATTCTTATCCAAGTGGTCCCTTTAAAGATGAGGCTGTAGATGATGAGAACAAACCCGTGGTTAAAGGAAAACACACCGATCAAGTTTTTACCCTGTCAAAGCAATTAAAGACAGTTAAATCATCGGAGAGTTCCTTGTGTAGTGATCAGAAAGATTTGACAGTATCAACTGCAGAAGTTCCACTTTCTAATGAAGTTAGTTTACCAACTAAACGAAGTAGACGTAAAATGATTTTACCGAGAACATCCTTGCCTAAGGAAAAGTCTTCTGAGTACATATTGAAAAGCCAACCTAATAAATACTCTACCCTAGAGGAAAAGCTTTCTAGTTGCTTATCATCTTGTATGGTTCGCAGATGGTTTATTTTTGAATGGTTTTATAGTGCAATTGATTATCCGTGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGTGTCGAGTGGAGTGTCATAAAAAGTTCCCTGGGCAAACCCCGCAGGTTTTCTGAACACTTTCTACTTGAAGAAAGGGAAAAACTTGAACAGTATCGGGAATCAGTGAGGAAACATTACACTGAACTGCAGACTGGTATCAGGGATGGACTTCCAACAGATTTAGCTAGACCATTATATGTTGGACAACGAGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGCAGTGTGCTTACTGTTGACTATGACAAGTGCAGGATTCAGTTTGACCGTCCTCAATTAGGTGTTGAATTTGTAATGGACATTGATTGCATGCCTTTGAATCCACTAGATAATATGCCAGAAGCTCTGAGGAGGCAGATTGGTGCCAGAAAAGCCTCTTTTATGACTAAAGAGCCACATATTAAtggaaattcaaattttggggGGTGCGAAATGCACTATTCACCTGTGAAGGAAAAGGTTGCTACCATTGATAACCTCTCTGCACAAGCAGGTTGTGCACAAGCGTGTAAAGTGACACACCATCAAGCTAAGGAAGCTGATATACATGCACTTTCTGAACTAAAGCGTGCTCTAGATAAAAAGGAGACACTGTTGATGGAGCTTCGAAGTGCAAATAGTGACATATTGGAAAACCAAAATGGCATAAAATGCTTAAAAGACTCTGAGGTTTTCAAGAAGCATTACTGCCATGGTTTCTGA 2787 0.4019 MTTGLGCIEGTKWSTYTAQRESGKPYKRHKGSMAPTRKSRSVNKRISSSDDISPEKDGVNSNKNKQRKKKLTDKLGSQWSKEELERFYEAYRKYGRDWKKVAAVVHNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMIDHYNVLEGSDSERESNDAPGSRKPVKRKREKVQLSVTKDPVQSQSISSSDGCLSLLKKGRIDGIRPHAVGKRTPRVPVSYSYKKDDTENYVSPYRRSLKSTVDANDDEVAHVVALTLTEAAQRGGSPQVSKTPYRRVEQKSSPVLSCERKHQKSETARAKFHDVSVDEEFLEGSIESRGAENGEYARDNSSLMDMEGVGAVEVLQKGQKIYRKRERVENVGNHQLDDGGEACSGTEEGLSFSSLKEKVDIEVTNGKLEQFSPKSQRKRNKKLFFGDETTALNALQTLADLSLMMPTSTIESESSIQLKGERMAADKDDKPALPEATSTGHKRHKVKHCVVPKIEVSTSKKSKPGKESAKDTNALSESKEQLPFADTTWKRKRKSTVSKVANAKFDSYPSGPFKDEAVDDENKPVVKGKHTDQVFTLSKQLKTVKSSESSLCSDQKDLTVSTAEVPLSNEVSLPTKRSRRKMILPRTSLPKEKSSEYILKSQPNKYSTLEEKLSSCLSSCMVRRWFIFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLLEEREKLEQYRESVRKHYTELQTGIRDGLPTDLARPLYVGQRVIALHPKTREIHDGSVLTVDYDKCRIQFDRPQLGVEFVMDIDCMPLNPLDNMPEALRRQIGARKASFMTKEPHINGNSNFGGCEMHYSPVKEKVATIDNLSAQAGCAQACKVTHHQAKEADIHALSELKRALDKKETLLMELRSANSDILENQNGIKCLKDSEVFKKHYCHGF 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1710 928 Gene3D - 20 131 - -
Ssu7g1710 928 SUPERFAMILY Homeodomain-like 73 122 IPR009057 -
Ssu7g1710 928 SMART sant 75 123 IPR001005 -
Ssu7g1710 928 Coils Coil 880 903 - -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 18 75 - -
Ssu7g1710 928 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 113 IPR017930 -
Ssu7g1710 928 Pfam Myb-like DNA-binding domain 77 114 IPR001005 -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 265 280 - -
Ssu7g1710 928 CDD SANT 79 120 IPR001005 -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 150 176 - -
Ssu7g1710 928 Pfam DIRP 660 761 IPR033471 -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 150 186 - -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 43 75 - -
Ssu7g1710 928 SMART DIRP_2 661 762 IPR033471 -
Ssu7g1710 928 ProSiteProfiles Myb-like domain profile. 77 118 IPR001005 -
Ssu7g1710 928 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 33 909 IPR028306 -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 450 470 - -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 489 504 - -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 265 284 - -
Ssu7g1710 928 MobiDBLite consensus disorder prediction 442 509 - -
Ssu7g1710 928 ProSiteProfiles SANT domain profile. 74 111 IPR017884 -
Ssu7g1710 928 PANTHER LIN-9 33 909 IPR010561 GO:0006351|GO:0017053
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1710 Ssu-Chr7 35306746 35339169 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ssu7g1710 DIRP 5.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1710 - - gmx:100789533 1545.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1710 7 35306746 35339169 Ssu7g1710 7 35306746 35339169 ECH