Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1707 ATGGGAATGAATCTCGATTCCGGAGAGCTTCTGGCCGTGAAGCAGGTGCTGATTGCGGCAAGCAGTGCTTCCAAGGAGAAGGCACAGGTTCACATAAAAGAACTCGAGGAAAAAGTTAAGCTTCTCATAGATCTTTCGCATCCCGACATTGTTGTGAAGATATTTGGGCACAGTCAGAGAGGAGGACACCTTAAATATTCTCCTGGAGTTTGTTCCTGGTGGATCCATATCATCACTCTTGGGCAGGTCATAAGAACCTACACGAAACAGTTATTGCTTGGTCTTGAGTACTTGCACAAAAATGGAATCATGCACAGAAACATTAAGGGTGCAAATATTCTTGTAGATAGTAAAGGGTGCATAAAACTTGCAGATTTTTGGGCATCCAAAAAGGCTACCATTTCGGGTGCCAAGTCTATGAAAGGTACTCCACATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGCTTttCTGCTGATATTTGGAGCATTGGCTGTACCGTGATTGGCTCTACAGGAAGCCCTCCTTGGAGCCAACTCCACGAGGTTGCTGCCATCTTTCATATAGGGTCCACAAAGTCTCATCCGCCAATCCCTGATCACCTCTCTTTTAGAGGAAAAGATTTTCTTCTAAATGTTTGCAGAAgtatgttacttttatttttcagcTGCTTCCCTTCTCtcctaattatttttagtctagtttag 714 0.4174 MGMNLDSGELLAVKQVLIAASSASKEKAQVHIKELEEKVKLLIDLSHPDIVVKIFGHSQRGGHLKYSPGVCSWWIHIITLGQVIRTYTKQLLLGLEYLHKNGIMHRNIKGANILVDSKGCIKLADFWASKKATISGAKSMKGTPHWMAPEVILQTGHSFSADIWSIGCTVIGSTGSPPWSQLHEVAAIFHIGSTKSHPPIPDHLSFRGKDFLLNVCRSMLLLFFSCFPSLLIIFSLV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1707 237 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 51 - -
Ssu7g1707 237 Gene3D Transferase(Phosphotransferase) domain 1 1 220 - -
Ssu7g1707 237 Pfam Protein kinase domain 3 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1707 237 SUPERFAMILY Protein kinase-like (PK-like) 3 215 IPR011009 -
Ssu7g1707 237 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 82 214 - -
Ssu7g1707 237 Coils Coil 18 45 - -
Ssu7g1707 237 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 51 - -
Ssu7g1707 237 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 82 214 - -
Ssu7g1707 237 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1707 Ssu-Chr7 35274693 35277159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1707 1 213 MAP Kinase Kinase Kinase AT1G09000 67.699 1.06e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu7g1707 Pkinase 2.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1707 - K20606 gmx:100779001 293.123