Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1706 ATGATTGGGGTAGTAAATTTCATGCAAATCCCAGACGTGGAACACAGAGAAGTTGGTTTTGACATTGACAGAAGCTACATTCCACGTGATCACTCTGGGGCTTTTATTGAGAAGAAAGATTTCTCCCTTCCATGCATGTCTTCACCGTTTGAGGAAGATGATGAGATCACTGAATCAAAAATAAAAGCCTTTTTGGATGAGAAGGCTTTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTACTTCAACAGTTTAAATACATCTTGTTCTTGCAATGTGATTATTGATAGACTGAATGATGAAACTGTTCCAAAATTCTTGAAATCACCTCCTAAAGGTAGGCCACCAAATCAGATACCAGTTAGCACGCCATCTAAAGCAGTTGACAACTCTGAAGTCCTGGAAGTAATGGCTCCTCATCAAATGTTGGCAATGCCAATGATGGTTCACAGGTCATTCCAGCATCTCCTCTTAATGAATGGAAAGGACTGTTAG 501 0.3952 MIGVVNFMQIPDVEHREVGFDIDRSYIPRDHSGAFIEKKDFSLPCMSSPFEEDDEITESKIKAFLDEKAFELKKLQTPLYEEYFNSLNTSCSCNVIIDRLNDETVPKFLKSPPKGRPPNQIPVSTPSKAVDNSEVLEVMAPHQMLAMPMMVHRSFQHLLLMNGKDC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1706 166 MobiDBLite consensus disorder prediction 109 128 - -
Ssu7g1706 166 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 39 116 - -
Ssu7g1706 166 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE MEKK1 39 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1706 Ssu-Chr7 35272984 35273576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1706 51 131 MAP Kinase Kinase Kinase AT1G09000 56.471 1.37e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1706 K20606 - gmx:100807537 155.992