Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1704 ATGAGCGATCAAAGcattcaaattcaaatgctCGCTGAAAAATTCCACCAATTCGTTCTTGACTGCGAACTGATGCAACCGTCAATCGCTCCCCGCTCAGATAATGTATCTAAGCTAGTGAACGAGAACTCTGATTCCATGGATGAAAACAGTATGTCCAATGGAATCCATGAAGTTTCTCCGGATAAGGGTCACACACTTCCCATATTGAAGAAAATACTTGATCTCGGTACTGAAATTCAGGATTTGAAGAAGCAGCACATAGCCTTATCTGATGAAGTGAAACTCTCTACTGAATCTTTTCCGGGCACTGATGTTTTGAAGTCTGTGCAGCTTCTCGGTACTGAATATGAactattgaaaagaaaatacctGGAGGAGTCCTCCGAGCGTAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCATTAAATGAGAGTGAAATTGCTAATGGGTCTGCATCTGTTATCAATTTTGAGTCGTCTTCAGATAACGAGCTTCAAGTCATTTGCTCAGATTCTTCTAGGaagcaatttaaatttgatcatgTATTTGGGCCGGAAGATAACCAAGAGGCCGTTTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGGTATAATGTCTGCATATTTGCCTACGGGCAAACTGGAACTGGGAAAACATTTACAATGGAGGGAACACCAGAACACAGGGGAGTTAACTACAGAACCCTGGAAGAATTATTTCGGATAACTGAAGAGAGACATGGCACAATGAAGTATGAATTGTCTGTTAGCATGCTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCTGCACAACCTACTAGGAAattGGAGATAAAGCAAGCTGCAGAAGGAACCCAAGAAGTTCCAGGACTAGTTGAAGCTTGTGTTTATGGAACTGAAGATGTGTGGGAAATACTTAAGACTGGAAACCGAGTCAGATCAGTTGGATCCACCTGTGCTAATGAGCTTAGCAGCCGTTCTCATTGTTTGTTACGAGTAACAGTAATGGGGGAAAATTTAATCAATGGCCAGAGAACAAAGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGCGTGGGAAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAACAAGTCTCTATCAGCTCTTGGTGATGTTATTTCTGCCCTTGCTTCCAAATCAGCCCACATCCCTTACAGGAACTCAAAACTCACTCATATGCTGCAAAGCTCTTTAGGAGGAGACTGCAAAACGTTAATGTTTGTGCAGGTAAGTCCAAGCGCAGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCCACCCGTGTCCGCAGAATTGAGAGTGGCCCTGCTCGCAAGCAAGTAGACCACACTGAGCTGTTTAAGTACAAGCAAATGGTAGAAAAGCTCAAACAAGACGAGAAGGAAACAAAGAAATTACAGGATAACTTGCAAATCTTGCAACTCAAGCTTGCTGCAAGAGAACACCATTGTAGAGCCCTTCAGGAAAAGGTTCGGGACCTGGAGAACCAGATagcagaagaaagaaaaaccagACTAAAGCAAGAAAGCAGATCTCTTGCTGCTGTTTCAGCTCAACCTTCATCATCATCACAACACACAACAGCTCATAAAACCATGACAGACAAGAAACCACCACTGAATCCTTCAAAACTGAGACTGCCACTGAGAAGAATAACCAACTCTTTGCCTCCACCGTCTCCTCTAAGATCAAAGAGTTACACCGCATTCATGAATGGAAAGGAAAACTCTGTCAGAAGGACCTCAATGGCAACAAATGCCGTGAGGCCAGCTGCACCATCAACAACAGCGCAGTTCCTTCAGGCAAGGAGGCGAGTGTCCTGTGCCGTGAGACCACCTGCACCATCAACAACGCAGGTCTTTCAGCCAAGGAGGAGGGTCTCCATTGCCACACTCCGTCCTGACACAACTTCTGACATGACAACTCCACTCCGTTCCTCGGCATTCCGAGTTACCAGTGGAACCAGTCAACAATCATTGATAAGAAGTCAAAGGAAAGATCGCTATTCAAGTTTGTTCGCCCCATTGCCAGAGTTGAGAGCATCAGTTGAGACAACACCAATGTCTGTAAGGAGCAGCAGCAAGTTTATGATGAGCAGTCCAGCACAGGCAGATTCCAGGGTGGGACAAACTAGGCATCCAACTGTTCTTGCACTTCAACGTAAACCTGTAGTCTGGAGTCCTCTTAAGCTAAGAGGCTTGAAAACTAACAGAAAGTCATCACTCTTGCCTTATCGTCCAACCCAAATGCAATAA 2364 0.4306 MSDQSIQIQMLAEKFHQFVLDCELMQPSIAPRSDNVSKLVNENSDSMDENSMSNGIHEVSPDKGHTLPILKKILDLGTEIQDLKKQHIALSDEVKLSTESFPGTDVLKSVQLLGTEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLNESEIANGSASVINFESSSDNELQVICSDSSRKQFKFDHVFGPEDNQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITEERHGTMKYELSVSMLEVYNEKIRDLLVENSAQPTRKLEIKQAAEGTQEVPGLVEACVYGTEDVWEILKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSAADLGETLCSLNFATRVRRIESGPARKQVDHTELFKYKQMVEKLKQDEKETKKLQDNLQILQLKLAAREHHCRALQEKVRDLENQIAEERKTRLKQESRSLAAVSAQPSSSSQHTTAHKTMTDKKPPLNPSKLRLPLRRITNSLPPPSPLRSKSYTAFMNGKENSVRRTSMATNAVRPAAPSTTAQFLQARRRVSCAVRPPAPSTTQVFQPRRRVSIATLRPDTTSDMTTPLRSSAFRVTSGTSQQSLIRSQRKDRYSSLFAPLPELRASVETTPMSVRSSSKFMMSSPAQADSRVGQTRHPTVLALQRKPVVWSPLKLRGLKTNRKSSLLPYRPTQMQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1704 787 CDD KISc_C_terminal 142 469 - -
Ssu7g1704 787 ProSitePatterns Kinesin motor domain signature. 368 379 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu7g1704 787 PANTHER KINESIN-RELATED 81 780 IPR027640 GO:0003777|GO:0007018
Ssu7g1704 787 ProSiteProfiles Kinesin motor domain profile. 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1704 787 PRINTS Kinesin heavy chain signature 369 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1704 787 PRINTS Kinesin heavy chain signature 418 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1704 787 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1704 787 PRINTS Kinesin heavy chain signature 338 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1704 787 MobiDBLite consensus disorder prediction 546 565 - -
Ssu7g1704 787 Coils Coil 485 547 - -
Ssu7g1704 787 MobiDBLite consensus disorder prediction 540 580 - -
Ssu7g1704 787 Gene3D Kinesin motor domain 139 511 IPR036961 -
Ssu7g1704 787 Pfam Kinesin motor domain 150 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1704 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 505 IPR027417 -
Ssu7g1704 787 SMART kinesin_4 142 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1704 787 PANTHER KINESIN-LIKE PROTEIN KIN-14S 81 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1704 Ssu-Chr7 35264270 35268224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1704 110 494 Calmodulin-binding Proteins AT5G65930 42.172 1.56e-82 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1704 K10406 - gmx:100788477 1352.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1704 7 35264270 35268224 Ssu7g1704 7 35264270 35268224 ECH