Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1681 ATGGAAGTTAATGCTGCAACCACTGTACCTGCAGGGCCACCTACTCAGAACCATTCTTACATACAGCATCACTTCCATTCAGAAAAACATAATCATAGCCATGGCCATTTCCCCTCCAAAGCCATTCTCATAACCATCGCAGTGGTCACCTTAGTAACGATcctatttatcatttttgtgGTCTTATTCTTGATCCGTCGGAAAAAATCCTCCCGCAAGAATGGAACTTGCGAAGAAGGCAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATTGCCTCAACAACGTTGAATTCTAGCCCAGATGTGAAGATTGGGTGTCTTCATGGGGGAAATTTGAGCAGGGCCCCAGCACCAAAATTTCGAGGAGTCCAAGTGTTCACGTATAGGGAGTTAGAAATTGCCACGGACGGATTCAGAGAAGCAAATGTGATTGGTAGTAATGGAGGGCATGGCTTGGTGTATAGAGGAGTTCTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTTCGCAGTGAGGGTAAACAAGGGGAGCGTGCCTTCAGAATAGAGGTCGATCTCCTAAGTCGCTTGCACTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTATTGATTTTTGAATACATGCCCAATGGTACACTCCACTATCATCTTCACTCCCCCAACGATCAAACTCAACCATTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCACTGGAATTCCTGCATGAACACGCAGCCTCACCTGTGATCCACAGAGACTTCAAGAGTAACAACGTTCTATTGGATCAAAATTTCCGTGCCAAGGTGTCCGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAATGGTCAGGTTTCCACCCGTGTGTTAGGGACCACTGGATATCTGGCACCAGAGTATGCCacgggtaagcttactacaaagTCGGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTGCTAACCGGACGTGTGCCAGTTGATATCAAGCGGGCCCCTGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAGCAGAGAAAAGGTGATTGAAATGGTTGACCCAGCTCTACGCGGACAGTGCTCAAAGAAGGACTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCACTTGTGAGGAACCCATCCTCTCGTAGTTCATCTAGCTCCTTACGATTTCAGAAACAAACGCCAAGTCCAAGTCATTAG 1320 0.4621 MEVNAATTVPAGPPTQNHSYIQHHFHSEKHNHSHGHFPSKAILITIAVVTLVTILFIIFVVLFLIRRKKSSRKNGTCEEGSRELHDTSSRLIASTTLNSSPDVKIGCLHGGNLSRAPAPKFRGVQVFTYRELEIATDGFREANVIGSNGGHGLVYRGVLSDGTLAAIKLLRSEGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQHHRLLIFEYMPNGTLHYHLHSPNDQTQPLDWWARMRIALDCARALEFLHEHAASPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTSREKVIEMVDPALRGQCSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSSRSSSSSLRFQKQTPSPSH 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1681 439 ProSiteProfiles Protein kinase domain profile. 140 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1681 439 SUPERFAMILY Protein kinase-like (PK-like) 121 412 IPR011009 -
Ssu7g1681 439 CDD STKc_IRAK 145 415 - -
Ssu7g1681 439 MobiDBLite consensus disorder prediction 418 439 - -
Ssu7g1681 439 Gene3D Transferase(Phosphotransferase) domain 1 216 433 - -
Ssu7g1681 439 PANTHER OS01G0750732 PROTEIN 3 438 - -
Ssu7g1681 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Ssu7g1681 439 Pfam Protein tyrosine and serine/threonine kinase 148 412 IPR001245 GO:0004672|GO:0006468
Ssu7g1681 439 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 3 438 - -
Ssu7g1681 439 Gene3D Phosphorylase Kinase; domain 1 112 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1681 Ssu-Chr7 34829620 34833278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1681 40 437 Receptor kinase-like Gene Family AT3G58690 55.147 9.32e-150 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Ssu7g1681 PK_Tyr_Ser-Thr 4.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1681 - - gmx:100499645 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1681 7 34829620 34833278 Ssu7g1681 7 34829620 34833278 ECH