Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1675 ATGGCTTTGTTACCGTCACCACTCCATGTTTCAACTTCGTACCTCAGCACGGACACCATTGTGGCTCTCTGTGTATTCTTCACTCTCCTGTGTGCTTGCATCATCATTGGCCATCTTCTGGAAGAGAATCGGTGGGCCAATGAATCCATCATTGCCCTCCTTTTGGGTTTGTGTGCTGGAACTGTGGTGCTGTTGGTGACCAAGTTTCATAGTACCAAGATTTTAATGTTCAGTGAAAACTTGTTCTTTCTTTACTTGCTTCCCCCAATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACAACTATAGTGCTCTTTGGGGTCCTTGGAACAGTTATTTCATTCTGTCTGATATCTGTTGGTGCCCTTCTGCTCATTCAGAGGATTGGCTTATCTAACCTTGGCATAAAAGACTACCTAGCCATTGGTGCCATATTGTCAGCAACGGACTCAGTGTGTACATTGCAGGTTCTCAGTCAGGATGAAACACCTTTGCTTTACAGCATTGTATTTGGGGAGGGAGTAGTAAATGATGCTACGTCTATAGTGCTTTTCAATTCGGTCCAATCGCTAGACTTCAGCAGCATCGATGCTATTACAGCCTTGAAATTGTTGGGGACCTTCCTTTACCTCTTCTGCACTAGCACTGCCCTTGGCATAGTAGTTGGCCTTTTAAGTGCTTATATTATGAAAACTCTTTATCTCGGAAGGCATTCTACTGATCGTGAAGTTGCACTTATGATGTTGATGGCATATTTGTCATATATGATCGCTGAGCTTTTGAATCTCAGTGGGATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACTTGGCACAATGTTACAGGAAACTCAAGGACAACAACCAAGCACTCCTTTGCAACCATCTCATTCATTGCTGAAacctttatatttatatgtgtcGGCATGGATGCTTTAAACATCGACGAATGGAAAAAAAGCAAAGCcagTGCAGGAACTTCAGTTGCTGTGAGTTCAACGTTGTTTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCAAATATTACAAATTACATCAAGACAACAGAGAGTACCAAAATTGAGTTTCGTTCACAGTTTATCATATGGTGGGCAGGCCTGATGAGAGGTGCAGTGACTATTGCCCTGTCTTATAACCAGTTTGCAAAAGCCAGGACAGCATCAGCTGAAGACTCTGCATTAATGATCACCTCTACTATAATCGTGGTCTTATTCAGTACTGTGGTATTTGGCCCCATTACAAAGCCTCTGATTGAGGCTGTGCAACCAAGGCATTCAACACTAGCCATTTCTGATTCCACTCATAATCCAGAATATTTGAGATTCCTATTGCTTGAAAACAGTGGTAACCAAAGCAACGGCAACGAACCATTTCAAAGGCGAAGAAGGCTAGGTTTGCTAATGAGTCATCCAACCACAACTATTCACTACTTTTGGAGGAAATTTGATGATAAGTTCATGAGACCCGTGTTTGGTGGAAGGGGTTTTGTTCCAGTAGTTCCTGGCTCAGCACCCAGTGAAGCAGAGGAGGTTTCTTGA 1602 0.4195 MALLPSPLHVSTSYLSTDTIVALCVFFTLLCACIIIGHLLEENRWANESIIALLLGLCAGTVVLLVTKFHSTKILMFSENLFFLYLLPPIIFNAGFQVKKKQFFKNFTTIVLFGVLGTVISFCLISVGALLLIQRIGLSNLGIKDYLAIGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDATSIVLFNSVQSLDFSSIDAITALKLLGTFLYLFCTSTALGIVVGLLSAYIMKTLYLGRHSTDREVALMMLMAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVTGNSRTTTKHSFATISFIAETFIFICVGMDALNIDEWKKSKASAGTSVAVSSTLFALVLIGRAAFVFPIANITNYIKTTESTKIEFRSQFIIWWAGLMRGAVTIALSYNQFAKARTASAEDSALMITSTIIVVLFSTVVFGPITKPLIEAVQPRHSTLAISDSTHNPEYLRFLLLENSGNQSNGNEPFQRRRRLGLLMSHPTTTIHYFWRKFDDKFMRPVFGGRGFVPVVPGSAPSEAEEVS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1675 533 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 24 449 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ssu7g1675 533 Pfam Sodium/hydrogen exchanger family 27 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu7g1675 533 PANTHER SODIUM/HYDROGEN EXCHANGER 9 531 - -
Ssu7g1675 533 Gene3D - 142 194 - -
Ssu7g1675 533 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ssu7g1675 533 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ssu7g1675 533 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ssu7g1675 533 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ssu7g1675 533 PANTHER SODIUM/HYDROGEN EXCHANGER 9 531 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1675 Ssu-Chr7 34687165 34692749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1675 8 528 Antiporters AT3G05030 59.357 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1675 K14724 - mnt:21403543 754.207