Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1660 ATGGCTGGGAGTAACCAACTTAACCCCAACGATTCTAAGATGGTGGTTCCGCTGAATATGTGGGTTCTGATCTCAAATTTCAAGTTGGCATACAATCTTCTTCGTCGCCCGGATGGCACTTTCAACCGGGACTTAGCAGAGTTCCTTGATCGGAAAGTTCCGGCAAATGCGAACCCTGTGGACGGAGTGTTCTCTTTTGATGTCATTGTTGACCGTGAAACGAATCTCCTGACTCGAATCTATCGTCCTTTTGAGGGGGAAGAGCGCCAAGTGAACTTCGTTGACCTTGAGAAGCCAGTGAGCTCTGAGGTTGTTCCTGTCATCATATTCTTCCATGGTGGAAGTTTTGCGCATTCTTCAGCTAATAGTGCTATATATGACACCCTGTGTCGTCGCCTGGTGGGTATCTGTAAGGCTGTTGTGGTGTCTGTGAACTATAGGCGTGCACCTGAGAATAGGTATCCCTGTGCATATGACGATGGATGGACAGCTCTTAAATGGGTTAGTTCTAGATCTTGGCTTCAGAGTAGGAAGGATAAGAAAGTTCATATCTACATGGCTGGGGATAGCTCGGGTGGGAACATTGTGCACCATGTTGCCCTCAAAGCTGTGGAGTCGGGGATTGAAGTGTTTGGGAATATACTGCTCAACCCATTGTTTGGTGGGCAGGAAAGAACCGAGTCTGAAAAGCGTTTAGATGGAAGGTATTTTGTTAGAGTGAAGGATCGAGACTGGTATTGGAGGGCTTTTCTTCCTGAAGGGGAAGATAGAGACCATCCTGCATGTAACCCGTTTGGCCCCAAGGGCCGGAGCCTCAAAGAGATTAGGTTTCCCAAGAGCCTTGTGGTGGTTGCTGGTTTAGACCTTGTTCAGGACTGGCAGTTGGGTTATGCCAAAGGGCTTGAGAAGGCTGGCCAAGAAGTGAAATTGCTATTCCTGAAGCAAGCAACCATTGGGTTTTACTTGCTGCCAAATAATGAGCACTTCTCTCCGGTTATGGAtgagataaaatattttgtcagcTCTGACTGTTGA 1035 0.4667 MAGSNQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPFEGEERQVNFVDLEKPVSSEVVPVIIFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENRYPCAYDDGWTALKWVSSRSWLQSRKDKKVHIYMAGDSSGGNIVHHVALKAVESGIEVFGNILLNPLFGGQERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHPACNPFGPKGRSLKEIRFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQEVKLLFLKQATIGFYLLPNNEHFSPVMDEIKYFVSSDC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1660 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Ssu7g1660 344 PANTHER GIBBERELLIN RECEPTOR GID1C 2 340 - -
Ssu7g1660 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Ssu7g1660 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Ssu7g1660 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Ssu7g1660 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 340 - -
Ssu7g1660 344 SUPERFAMILY alpha/beta-Hydrolases 33 337 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1660 Ssu-Chr7 34581883 34583500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1660 1 344 Carbohydrate Esterase AT3G05120 74.783 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1660 K14493 - gmx:100815161 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1660 7 34581883 34583500 Ssu7g1660 7 34581883 34583500 ECH