Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1658 ATGGACTGCAACAAGGACGAGGCTGTGAGGGCTAGGCAAATTGCCGAAGCTAGAATGCAAAGAGGTGAATTTGTGGAGGCACTCAAGTTCGCTACAAAGGCTAAAAAACTGTATGCTGATGTTGAAAACATTACCCAGATTCTCACGATTTGCGAGGTTCACAGTGCTGCAATGAAAAAATTCTGTGGCTCTGACATGGACTGGTATGCAATTCTTCAGATTGAAGGGTTGGCTGATGAAGCTACCATAAAGAAACAGTACAGGAGGCTTGCACTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGGTGTTGAGTGACCAAGCAAAACGTTCTTTGTATGACATCAAGTTTGGAGCCTCCGTGAGAGGCGCCGTGCCTAAGACCTCACACCATTATTCAAATGGGAAAGTGTTTGCCGCAAAACGTGATGcgaatgcaaaaaaaattcagaagaaTTTTGATTTGCACCATTACTCAAATGGGAATGTGTTCGCTGCAAAACATGATGCAAATACAACAAATTTTCAGAAGAATTCTGGTTCACACCATTACTCAAATGGGAATGTATTTGCTGCAAAACGTGATGCAAATGCTACAAATTATCAGAAGAATTCTTATCCGAGCTCCACCGGTTCCAACAACCAAGCTGGACAGAAGACATTCTGGACATCTTGCCAACATTGTAATACTAAGTACCAGTACTGCGTAATTGTTGTAAATGCAACCTTACGCTGTCCACAGTGTTTGAAGTCATTTAAAGCTCATGTTATTAGTTTTGGATACCAGGGTGTCTCACCAATATTTACTTCGGTAAATATCCAGAAAGAGGCTCCAATGCATGGTCCCTCAAAACCAGCCTCAGAAAGTACTGGTGTAAATCCTAAATCTATGAAAAAATGTGCTGCTGGAGCTGATGGTCATTGTGATGGTGAAAAGAGTAAAGATGGCTATGTTCCTGCATCCAAAGGCATGGAGTCGCAAACCTCTAAAAATGTTGGAAGTAAAAGAGTAAGGCAGTCAGCACCAGATTCAGATTTCAACCCAAGAAATGATGAGATGAAAGATGCCTATGTTCGAGAAAATGATGTTGATCCTTCAAGAGTTAATGCAAGAAGATCTTCCAGGAAAAAACAACGTGTTTCATATGTGGAAATCCCTGAAGATGAcgattttgaaattccttctaaAAAGCCACGACAAAATGGACCACTTAACGCGGACGAAGCTGAGAAAAAGAACGTGCCTGCAAGTGGTGGATCGTCCAACAACAATAATCCAGCTACTTCAGCTGCTGGTGTGGCTGATCAGAACAGACACAAGGTATCCGAGTCAGATATTGGTCTTAGAACGTCCAAAGAGGATAACTGCTCTCCATTGAATTCAAATGTTCCTTCTGGTCCAGAGGTCTTTCATTGTCCTGATACAGATTTCAATGATTTTGAGAAGGGTAAGGAGGAGGATTGTTTTGCTGTTAATCAGTTGTGGGCAATTTATGATAGCACTGATACGATGCCAAGATTTTATGCTCTTGTCAAGAAAGTGGCCTCCCCTTTCAAGTTGCAGATTAATTGGTTGGAACCTGACCCAGATGACCAAGGTGAGATTGATTGGCATGATGCAGATTTGCCTATTGCTTGCGGTAAGTTCAGACTTGGTAGCTCTCAGAGAACTACAGATCGTACTATGTTCTTTCATCAGATGCGGTGCATAAAAGGAAGTGGCAAAGGTTCATACCTGGTACGTCCTAATAAGGGAGAAACTTGGGCAATTTTCAGAGATTGGGATATCAAGTGGAGTTCTAGTCCAGAAAAACATTTGGAGTATGAGTTCGAATATGTGGAAATCCTATCATATTTTGTTGAGAATGTTGGCATTGCAGTTGCTTATCTGGGCAAAGTGAAAGGATTTGTTAGCCTCTTTCAGAAAACTGAGAAGAGTGGAGTGAACATGTTTTATGTCCTACCTAATGAGCTATATAGGTTCTCGCATCAAATTCCTTCGCATAAGATGACTGGTAATGAAAGGGAGGGTGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGCCCTGCCTACTAATCTCTTTGAAGTTGGTGATTCTGGTAATGTGAAGATGGTGAATGGAGTGTTAAACACTGGAGTGGAGGCTAATGAGAGGATTGACAAGGCAATGTGA 2217 0.4123 MDCNKDEAVRARQIAEARMQRGEFVEALKFATKAKKLYADVENITQILTICEVHSAAMKKFCGSDMDWYAILQIEGLADEATIKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANGVLSDQAKRSLYDIKFGASVRGAVPKTSHHYSNGKVFAAKRDANAKKIQKNFDLHHYSNGNVFAAKHDANTTNFQKNSGSHHYSNGNVFAAKRDANATNYQKNSYPSSTGSNNQAGQKTFWTSCQHCNTKYQYCVIVVNATLRCPQCLKSFKAHVISFGYQGVSPIFTSVNIQKEAPMHGPSKPASESTGVNPKSMKKCAAGADGHCDGEKSKDGYVPASKGMESQTSKNVGSKRVRQSAPDSDFNPRNDEMKDAYVRENDVDPSRVNARRSSRKKQRVSYVEIPEDDDFEIPSKKPRQNGPLNADEAEKKNVPASGGSSNNNNPATSAAGVADQNRHKVSESDIGLRTSKEDNCSPLNSNVPSGPEVFHCPDTDFNDFEKGKEEDCFAVNQLWAIYDSTDTMPRFYALVKKVASPFKLQINWLEPDPDDQGEIDWHDADLPIACGKFRLGSSQRTTDRTMFFHQMRCIKGSGKGSYLVRPNKGETWAIFRDWDIKWSSSPEKHLEYEFEYVEILSYFVENVGIAVAYLGKVKGFVSLFQKTEKSGVNMFYVLPNELYRFSHQIPSHKMTGNEREGVPRGSFELDPAALPTNLFEVGDSGNVKMVNGVLNTGVEANERIDKAM 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1658 738 SMART dnaj_3 66 123 IPR001623 -
Ssu7g1658 738 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Ssu7g1658 738 PRINTS DnaJ domain signature 103 123 IPR001623 -
Ssu7g1658 738 PRINTS DnaJ domain signature 69 87 IPR001623 -
Ssu7g1658 738 PRINTS DnaJ domain signature 87 102 IPR001623 -
Ssu7g1658 738 PANTHER - 1 717 - -
Ssu7g1658 738 MobiDBLite consensus disorder prediction 359 410 - -
Ssu7g1658 738 MobiDBLite consensus disorder prediction 336 358 - -
Ssu7g1658 738 CDD DnaJ 67 120 IPR001623 -
Ssu7g1658 738 Gene3D DnaJ domain 64 196 IPR036869 -
Ssu7g1658 738 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Ssu7g1658 738 Pfam DnaJ domain 67 128 IPR001623 -
Ssu7g1658 738 MobiDBLite consensus disorder prediction 291 476 - -
Ssu7g1658 738 MobiDBLite consensus disorder prediction 429 446 - -
Ssu7g1658 738 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 717 - -
Ssu7g1658 738 MobiDBLite consensus disorder prediction 316 332 - -
Ssu7g1658 738 Pfam Domain of unknown function (DUF3444) 482 688 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1658 Ssu-Chr7 34560473 34562689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1658 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.538 1.91e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1658 - - ccaj:109790324 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1658 7 34560473 34562689 Ssu7g1658 7 34560473 34562689 ECH