Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1646 ATGCCTGTTCCCAACGGAGAAGAGCAGATTCTGTTACCTTCAGAAAGTGGAAGTGAGGTTTCAAAGTCACCCTCATTGGATTTGAACCCAGATTCAGTTGATGGGTCCCCACCTGTTTCCACCGTTTACACTGATGTGGGTGTCGTGCCAGAACACGATAAGAACGAGCTTGAGCACTTGATATCCAATTTAGAAAGAGAAATTGAGGAGCTGAGGGTCAAGCAGAAGAAATTGGATAAAAAGCGGAGAGAAGCATTGAGTAAGATATTGGACATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCGAATCTGGTAATAGAGAAGAGAAGAATTTCTGAACCGGTATCAGCTGAACCAGAGAAAATTCGGGTTAAGTTGGGAGGAGCAAGGAAAGATTTTGAGTTCGATAAGGTTTTTACTCAAGAAGCGAGCCAAGAAAGTGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCCGCAATGGACGGGCACAATGTGTGTGTTTTTGCCTATGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAACGAGCTGCCAGGAATTATTCCGCGTGCTCTTGAAGAGCTCTTTCGTCAAGCCTCTTTGGATAATTcatcttcttttactttttcaatgAGCATGTTGGAAGTTTATATGGGCAATCTTAGGGATCTGCTAGCTCCAAGACCGTCTGGTAGACCACATGAACATATGACAAAGTgCAATCTCAACATCCAAACAGATCCAAAGGGATTGGTTGAAATTGAGGGTCTCTCAGAAGTGCAAATCAGTGATTATGCTAAAGCCAAATGGTGGTACACCAAGGGCAGACGGTTCAGATCCACCTCGTGGACTAATGTGAATGAGGCATCAAGCAGGTCTCACTGCTTCATATATCTAGCTTGA 918 0.4281 MPVPNGEEQILLPSESGSEVSKSPSLDLNPDSVDGSPPVSTVYTDVGVVPEHDKNELEHLISNLEREIEELRVKQKKLDKKRREALSKILDIKGSIRVFCRIRPNLVIEKRRISEPVSAEPEKIRVKLGGARKDFEFDKVFTQEASQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNELPGIIPRALEELFRQASLDNSSSFTFSMSMLEVYMGNLRDLLAPRPSGRPHEHMTKCNLNIQTDPKGLVEIEGLSEVQISDYAKAKWWYTKGRRFRSTSWTNVNEASSRSHCFIYLA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1646 305 MobiDBLite consensus disorder prediction 1 40 - -
Ssu7g1646 305 PRINTS Kinesin heavy chain signature 164 185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1646 305 PRINTS Kinesin heavy chain signature 289 305 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1646 305 Pfam Kinesin motor domain 120 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1646 305 Gene3D Kinesin motor domain 42 305 IPR036961 -
Ssu7g1646 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 304 IPR027417 -
Ssu7g1646 305 ProSiteProfiles Kinesin motor domain profile. 95 305 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1646 305 SMART kinesin_4 93 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g1646 305 Coils Coil 54 88 - -
Ssu7g1646 305 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 302 - -
Ssu7g1646 305 MobiDBLite consensus disorder prediction 11 39 - -
Ssu7g1646 305 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1646 Ssu-Chr7 34300922 34302465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1646 67 302 Calmodulin-binding Proteins AT5G65930 37.349 3.03e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1646 - - gmx:100785581 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1646 7 34300922 34302465 Ssu7g1646 7 34300922 34302465 ECH