Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1644 ATGAGTGAGAGAGTGAAGAAGGAAAAGCAAACAGAGAAAAAGGAGAGGATGAAAAACATCTTCAAGAAGCTTCACATAGGAAGCAACCACGATCCTCATCGATCCAACGAAATTTCGCCGCCTGTGCCGTCGCTGTCTTGCGCCGCCGATCAGTCTCAGAGTTCAGGCGCCACTCCGGCGAGtccgtcgtcgtcgtcgtcgccTTCCACAGCTGTGCTGACTCCCGGCGGAGGCGGCGGCGCGAGTCCGGTGGTCAATCGGCAGGATTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGCTAGCCCTAGCTATCAGCGCTTCCAATTCGGAGTTCCGCGATGATCCGGAGAAGGATCAGATCCACGCGGCGACGCTGTTGAGCTTGGGAGGGCATCGAATCGATTCGACGAGGAACAAGGACGATGTGGCGGAGGCGCTGTCGAGGCAATACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCCCTATAATGATTCAGTAATGCAAGGAAAGATGCCATCTCGAACAGATCTCGAAGCAAACCCTGGAGGTTCTGAGGTGGTCATTGTTAATCGAAAAATTGATCCTGCTCTGGAAGAATTGATACAAATTGCACAATGTATTGCTTTAGACTGTCCTGTCACTATTTTGGTACAAAGGCTTGCTGAACTTGTGACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAATATTATGTTAGCAAGATGGACAGAAACAAGAGCAGATTTAAGGACATCTCTTCACACAATTGTATTGCCTCTAGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAATTGGAGGGTGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCGGGGACACTTATCCCAGCTGATATTTTAAGCATCAAGGATAGTGCTTTTAAGTCTTACAATCCCAAGATTTTGCCAAGTTTACCTTCCACTAAGGATACTGAATTTTCTTACTCAAGACCTATCCAACCATCTCATGGTGAAGGTAGTAGTCAAAATTCTGTCATAAAAGATCATTCACCGCCCTGGAATGGAAAATCATATTTTGAGAAGTCAGAGGCTTCAAGCTTAGGATTGAGCAGAGACACTGGCATTGGTCCTTCTAAAACTCCTAATAAAGGGGCTCCTAACCAACTGGAAAATTTGCCAGCCTTGTCTGGTACTTCTCTGTACAAAGGGACTCTTGGAATGAATACAGTTGGTGATGGGGCAAGATTGAATGTCAATGTTGTACCATATCCTCATAACAACCCCAACGACTCTCGGAACCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCTCTGTACATAACAAACCTGTAGAAAATAAACCTCCTGAGCTCAAAAGTACTAAAAACAATACTGTTTCTGGTCGACCCCCAGTGCCATTGATGTGGAAGAATCATCATGCTTACAATGAAGTCCCCAGGAAAACTAATCATAACCCTAATGAATACAACCCTCCCTTATTTGTTTCCAATGGTTCTTCTACTTCTGAAAATATTGACCTTAGTAGTTCCAAATcatcatataattcaaatataaataatgatgtAAATGCTCAAACTTTGGCGCAAGTTACTGGTTCCGTTTTACCACATGATGTACCCAAACTGAACCGGATTGAGGATCTCAATGCTGATTTTAACCAGGGGGATTTGGAAATTTCTCAAAACATCATGGTAGAGTCGCTTAAGGAACCTGAAAACATTGAAATCAGATATCATGACCGGAGGAAGTGTACAAATGACAGATTCATGGgaaacaatttgaaattaaaagatcCGGAGAGTCCTAGCTCATCAATTGCTTCCACAACAAATAGGGTTGATCAAATATTGGATGATGTAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATACCATGCTGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCATTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTACGGCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACCGAATTCTTCATCGTCCTAATTGTCAGCTTGATGAGAAACGAAGAATAAAAATGGCCCTGGATGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCACCGAGATCTAAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGGTTGTCACGCTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAGAAATGCGATGTTTATAGTTTTGGGGTCATCCTATGGGAGCTTGCCACTCTAAGATTGCCGTGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTTGGTTTCCAAAACCGTAGACTTGATATTCCTAAGGAAGTTGATCCTATAGTTGCAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTTCACAACTCGCAGCGGCTCTAAAGCCTCTGCAGTGTCTGGTTATCCCATCTCATCAAGACCAGGTAGCTCCACCTATGCAGCAGGAGATTTCTGTAAATTCCACCCCATGA 2904 0.4273 MSERVKKEKQTEKKERMKNIFKKLHIGSNHDPHRSNEISPPVPSLSCAADQSQSSGATPASPSSSSSPSTAVLTPGGGGGASPVVNRQDFFSSEEEFQVQLALAISASNSEFRDDPEKDQIHAATLLSLGGHRIDSTRNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSRTDLEANPGGSEVVIVNRKIDPALEELIQIAQCIALDCPVTILVQRLAELVTSHMGGPVKDANIMLARWTETRADLRTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEGEREFLVDLMAAPGTLIPADILSIKDSAFKSYNPKILPSLPSTKDTEFSYSRPIQPSHGEGSSQNSVIKDHSPPWNGKSYFEKSEASSLGLSRDTGIGPSKTPNKGAPNQLENLPALSGTSLYKGTLGMNTVGDGARLNVNVVPYPHNNPNDSRNLFADLNPFQIKGMGKASVHNKPVENKPPELKSTKNNTVSGRPPVPLMWKNHHAYNEVPRKTNHNPNEYNPPLFVSNGSSTSENIDLSSSKSSYNSNINNDVNAQTLAQVTGSVLPHDVPKLNRIEDLNADFNQGDLEISQNIMVESLKEPENIEIRYHDRRKCTNDRFMGNNLKLKDPESPSSSIASTTNRVDQILDDVDVGECEIPWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEYLPRGSLYRILHRPNCQLDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPIVARIIWECWQQDPNLRPSFSQLAAALKPLQCLVIPSHQDQVAPPMQQEISVNSTP 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1644 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Ssu7g1644 967 PRINTS Tyrosine kinase catalytic domain signature 909 931 IPR001245 GO:0004672|GO:0006468
Ssu7g1644 967 PRINTS Tyrosine kinase catalytic domain signature 799 817 IPR001245 GO:0004672|GO:0006468
Ssu7g1644 967 PRINTS Tyrosine kinase catalytic domain signature 865 887 IPR001245 GO:0004672|GO:0006468
Ssu7g1644 967 PRINTS Tyrosine kinase catalytic domain signature 846 856 IPR001245 GO:0004672|GO:0006468
Ssu7g1644 967 PRINTS Tyrosine kinase catalytic domain signature 760 773 IPR001245 GO:0004672|GO:0006468
Ssu7g1644 967 MobiDBLite consensus disorder prediction 1 32 - -
Ssu7g1644 967 Gene3D Phosphorylase Kinase; domain 1 679 763 - -
Ssu7g1644 967 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 81 960 - -
Ssu7g1644 967 Gene3D Transferase(Phosphotransferase) domain 1 765 945 - -
Ssu7g1644 967 Pfam Ethylene-responsive protein kinase Le-CTR1 144 337 - -
Ssu7g1644 967 MobiDBLite consensus disorder prediction 401 435 - -
Ssu7g1644 967 MobiDBLite consensus disorder prediction 364 392 - -
Ssu7g1644 967 SUPERFAMILY Protein kinase-like (PK-like) 676 959 IPR011009 -
Ssu7g1644 967 ProSitePatterns Protein kinases ATP-binding region signature. 692 714 IPR017441 GO:0005524
Ssu7g1644 967 ProSiteProfiles Protein kinase domain profile. 686 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1644 967 MobiDBLite consensus disorder prediction 33 73 - -
Ssu7g1644 967 MobiDBLite consensus disorder prediction 364 435 - -
Ssu7g1644 967 CDD STKc_MAP3K-like 692 938 - -
Ssu7g1644 967 MobiDBLite consensus disorder prediction 1 86 - -
Ssu7g1644 967 Pfam Protein tyrosine and serine/threonine kinase 687 937 IPR001245 GO:0004672|GO:0006468
Ssu7g1644 967 MobiDBLite consensus disorder prediction 645 664 - -
Ssu7g1644 967 SMART serkin_6 686 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1644 967 MobiDBLite consensus disorder prediction 493 519 - -
Ssu7g1644 967 PANTHER SERINE-THREONINE PROTEIN KINASE 81 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1644 Ssu-Chr7 34286073 34295050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1644 17 922 MAP Kinase Kinase Kinase AT1G08720 55.806 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Ssu7g1644 PK_Tyr_Ser-Thr 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1644 - - gmx:100818780 1741.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1644 7 34286073 34295050 Ssu7g1644 7 34286073 34295050 ECH
Ssu7g1644 7 34286073 34295050 Ssu4g1150 4 18318070 18319857 PCT