Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1637 ATGGCATCCGATCTAAACGACGCCGTTTTCCCCGAAGAAGATCTCGACGACGACGACGAAACTCAAGAGGACGAAGAGGAGGACGACGAAGACGACGACGTTTTAGGCGAACCCGACGACGACGAAACCGAGCCCCCTCCCTCCGTCCTCGCCGCCGTAACCGTCGCCCTGCCCGGTTCCGCCGCCTCAAAAACCGCGTCAATTCCGGTCGCCGTCGCTGATTCCTCGCCGAAACGACAGCGCACGGAGCAAATAGAGGAGAAAAAAGTGCTGGACGATTCGCGGCGACTGTTCCAGCGCCTGTGGACGGACGAGGACGAGATCGGGCTCTTGCAGGGGTTTCTGGAGTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGGTTTCAACAAGAACCAGCTCGTCGAGAAGCTCCGAAGGTTGAAGAAGAAGTTCCGCAACGTCCTCAACAAAATCAGCTCCGGCAAGGAATTCTCCTTCAAGAGCCCTCACGACAGAGCCTCCTTCGAAATCTCGCGGAGGATCTGGAGCAACACCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCAACCCTAACGCTAACCCTAATTTCGGCCATTCGGCGAAGACGCCGCTGTCGCGGAAGCGGTCGCGGTCTCGATCAGAGAAGCGCGAGTTGAACTATGGTTCAGTGTTGAATAAGGATAATAATTGTATTGGcaatagtaataacaataataataaagataatgaaaattgtAGTAGTAGGAATAACGTACAGGTTTTGATTGAAGAGACGGTGAGGAGTTGTTTGTCGCCGGTGTTGAAGCAGTTGGCGAGTAGTGGCATGGGATTGGGAAGCGCTTTTGGTTTTGGGGGAAGAGGGTTCGCATTGAATCCCTTGCCAATGCCGTTGAGCTTTTTGAATTTGGGGATTGGGGAAATGGCGATGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAGCTGCAAGTGTATTCCAAGCGTTTGGAATTGGTGCAGGATGAGATCGAGGTTGCTTTGGAGGAGTTGCGATCAGCGGGAGGAGGATAA 1104 0.5226 MASDLNDAVFPEEDLDDDDETQEDEEEDDEDDDVLGEPDDDETEPPPSVLAAVTVALPGSAASKTASIPVAVADSSPKRQRTEQIEEKKVLDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKFRNVLNKISSGKEFSFKSPHDRASFEISRRIWSNTAPITGPVEDDDEINPNANPNFGHSAKTPLSRKRSRSRSEKRELNYGSVLNKDNNCIGNSNNNNNKDNENCSSRNNVQVLIEETVRSCLSPVLKQLASSGMGLGSAFGFGGRGFALNPLPMPLSFLNLGIGEMAMDEKWRKQQILELQVYSKRLELVQDEIEVALEELRSAGGG 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1637 367 PANTHER BNAANNG10740D PROTEIN-RELATED 1 365 IPR007592 GO:0006355
Ssu7g1637 367 Coils Coil 146 166 - -
Ssu7g1637 367 MobiDBLite consensus disorder prediction 195 238 - -
Ssu7g1637 367 MobiDBLite consensus disorder prediction 9 44 - -
Ssu7g1637 367 Pfam Protein of unknown function, DUF573 98 192 IPR007592 GO:0006355
Ssu7g1637 367 PANTHER BNAANNG10740D PROTEIN 1 365 - -
Ssu7g1637 367 MobiDBLite consensus disorder prediction 1 49 - -
Ssu7g1637 367 Coils Coil 340 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1637 Ssu-Chr7 34077754 34078857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1637 1 367 GeBP Transcription Factor Family AT5G28040 44.084 7.24e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ssu7g1637 DUF573 3.7e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1637 - - gmx:100817182 454.521