Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1633 ATGGCATCCGATCTAAACGACGCCGTTTTCCCCGAAGAAGATCTCGACGACGACGACGAAACTCAAGAGGACGAAGAGGAGGACGACGAAGACGACGACGTTTTAGGCGAACCCGActacgacgacgacgacgaaaCCGAGCCCCCTCCCTCCGTCCTCGCCGCTGTAACCGTCGCCGCGCCCGATTCCGCGGCCTCAAAAACCGCGTCAATTCCGGTCGCCGTCGCCGATTCCTCGCCGAAACGACAGCGCACGGAGCAAATAGAGGAGAAAAAAGTGCTGGACGATTCGCGGCGACTGTTCCAGCGCCTGTGGACGGACGAGGACGAGATCGGGCTCTTGCAGGGGTTTCTGGAGTACACGGCGCGGCGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGGTTTCAACAAGAACCAGCTCGTCGAGAAGCTCCGAAGAGTCCTCACTGACAGAGCCACCTTCGAAATCTCGCGGAGGATTTGGAGCAACACCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCAACCCTAACCCTAATTTCGGCCATTCGGCGAAGACGCCGCTGTCGCGGAAGCGGTCGCGGCCTCGCTCAGAGAAGCGCGAGTTGAACCATGGTTCAGCGTTGAATAAGGATAATAATTGTATTGGcaatagtaataacaataataataaagataatgaaaattgtAATAGTAGGAATAACGTACAGGTTTTGATTGAAGAGACGGTGAGGAGTTGTTTGTCGCCGGTGTTGAAGCAGTTGGCGAGTAGTGGCATGGGATTGGGAAGCGCTTTTGGTTTTGGGGGAAGAGGGTTCGCATTGAATCCCTTGCCAACGCCGTTGAGCTTTTTGAATTTGGGGATTGGGGAAATGGCGATGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAGCTGCAAGTGTATTCCAAGCGTTTGGAATTGGTGCAGGATGAGATTAAGGTTGCTTTGGAGGAGTTGCGATCAGCGGGAGGAGGATAA 1044 0.5163 MASDLNDAVFPEEDLDDDDETQEDEEEDDEDDDVLGEPDYDDDDETEPPPSVLAAVTVAAPDSAASKTASIPVAVADSSPKRQRTEQIEEKKVLDDSRRLFQRLWTDEDEIGLLQGFLEYTARRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRVLTDRATFEISRRIWSNTAPITGPVEDDDEINPNPNFGHSAKTPLSRKRSRPRSEKRELNHGSALNKDNNCIGNSNNNNNKDNENCNSRNNVQVLIEETVRSCLSPVLKQLASSGMGLGSAFGFGGRGFALNPLPTPLSFLNLGIGEMAMDEKWRKQQILELQVYSKRLELVQDEIKVALEELRSAGGG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1633 347 MobiDBLite consensus disorder prediction 9 48 - -
Ssu7g1633 347 Pfam Protein of unknown function, DUF573 101 158 IPR007592 GO:0006355
Ssu7g1633 347 MobiDBLite consensus disorder prediction 177 244 - -
Ssu7g1633 347 MobiDBLite consensus disorder prediction 1 52 - -
Ssu7g1633 347 PANTHER BNAANNG10740D PROTEIN 162 345 - -
Ssu7g1633 347 PANTHER BNAANNG10740D PROTEIN-RELATED 1 159 IPR007592 GO:0006355
Ssu7g1633 347 PANTHER BNAANNG10740D PROTEIN 1 159 - -
Ssu7g1633 347 PANTHER BNAANNG10740D PROTEIN-RELATED 162 345 IPR007592 GO:0006355
Ssu7g1633 347 MobiDBLite consensus disorder prediction 222 244 - -
Ssu7g1633 347 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1633 Ssu-Chr7 34019211 34020318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1633 54 347 GeBP Transcription Factor Family AT5G28040 43.020 6.13e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ssu7g1633 DUF573 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1633 - - gmx:100817182 398.282