Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1632 ATGGAAGTGTGGTATCTCCTCAACAATGCTTTCCTCGTTGGTTTCTTGGATCCTGTCGccctcctcttcctcctcctcctcttccgAAGAAGAAGAAACCTTGACATTAACACTGATGATGATGACATTAACTACGAAAACGACCAAGATGTCAACGTGGAAGATAACGACAACGACCATTTTCTTAGCTCATGCGACGTGGACGACACCATTCCCGTTGCACTTGCCGTTCCCAATGCCTCCCCCGCCGTGACGGTGGCCTTCCCAGCCGACGACGAAAGGAACACCgtccccaccaccaccaccaccaccactgtagTAACACGCTCGAAAGGACAGCGCACAGGCAAGTATTCGGGCATGGTGAGACAATATCATAGGCTGTGGACGAAGCAGGATGAGATGGAACTGTTGACGGGATACCTTGATTACATCAAACAGCATAGGAGGGCAACCACCTCTCTCCAAAACGACGTAGCCTCGTTGTATGATCACGTGAGGCCCAAACTGAACGTGGGTTTCAACAGGAACCAGCTTGTAGAGAAGCTGCGTAGGTTAAAGAGAAAACACAAGTTGGCCTTGGACAAAGGCAAGGACAAGGAGGTCCCCTTTAGGAACCCCCAGGAGCAGGCCATTTTCGAAATTTCCCACAAGATTTGGGGCAATTGCACGGATAACATAATAGACCAAGATGCTTTGGATGGTGATCAACCAGGACGCACTCCTGAAAGTCATGATCATGTTGGGAACGTTAAGGTGAAGATTGAACAAGTTGACAACAGTGATGAAATAGACAACAGAGCGGCAAAGCGGTCGCGGCTAGATGCAGATGATGTGAACGGAACAAATGAGCACAATAATGGTGACATACAGGGCTTCATTGAGGAGACAATGAGGTCCTGTTTCTCGCCATTGCTGAAGGAAGTGTTGGATGAAGCACAGGAAGAGCCACATCCTGGAATGGTGCCAATCCCAATGCCCTTATGCCCTGGGGAAGTGGACCATGAGCAATGGAGAAAACGGAGGATTTTGGAGCTGGAGGTGTATTTAAAGCGCTTGGAGATGTTGCAGGATCATATCAAGGCTAGATTGGAGGAGCTGCGATCTAGCTGA 1113 0.4609 MEVWYLLNNAFLVGFLDPVALLFLLLLFRRRRNLDINTDDDDINYENDQDVNVEDNDNDHFLSSCDVDDTIPVALAVPNASPAVTVAFPADDERNTVPTTTTTTTVVTRSKGQRTGKYSGMVRQYHRLWTKQDEMELLTGYLDYIKQHRRATTSLQNDVASLYDHVRPKLNVGFNRNQLVEKLRRLKRKHKLALDKGKDKEVPFRNPQEQAIFEISHKIWGNCTDNIIDQDALDGDQPGRTPESHDHVGNVKVKIEQVDNSDEIDNRAAKRSRLDADDVNGTNEHNNGDIQGFIEETMRSCFSPLLKEVLDEAQEEPHPGMVPIPMPLCPGEVDHEQWRKRRILELEVYLKRLEMLQDHIKARLEELRSS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1632 370 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 33 370 - -
Ssu7g1632 370 PANTHER BNAANNG10740D PROTEIN-RELATED 33 370 IPR007592 GO:0006355
Ssu7g1632 370 Pfam Protein of unknown function, DUF573 126 221 IPR007592 GO:0006355
Ssu7g1632 370 Coils Coil 176 196 - -
Ssu7g1632 370 Coils Coil 350 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1632 Ssu-Chr7 34006442 34007554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1632 71 369 GeBP Transcription Factor Family AT5G28040 32.967 6.93e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ssu7g1632 DUF573 2.3e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1632 - - gmx:102662842 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0281 4 4580970 4582193 Ssu7g1632 7 34006442 34007554 PCT