Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1621 ATGGCGGATTCTTCAAGCAAGTCAAAGGAGCAGCAGAGCACGCGTGTGTACCATCCCTACCAGGACCTCAACGTTCCCATCCAAAAGCTCTACAACCTCCCCACCGCGCCGGAGCACCTCTTCCCGGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGCGACAACCTCCAGTACTACACCGGCGCCGGCTACCTCTCCGGCGCCGTCGTGGGCGCCGCCCGGGGCACCCTCCAGGGCCTCCGGGAGGCCGAGTCCGGCGACTCCCTCAAGCTCCGCCTCAACCGAGTCCTCAACTCGGGGGGCCACGCGGGCCGCGGGCTCGGCAACTCGCTCGGCGTGTTGGGCCTCATCTTCGCGGGCCTCGAGACCGGGATGATCCACTTCCGGGGCGCCGATGACTTCGTCAACAGCGCCGTCGCCGGACTCGGCACCGGAGCGCTCTACAGGGCCGCCGCCGGACCCCGATCCGCCGCTATTGCCGGCGCCATCGGCGGAatcgccgccgccgccgcggTTGCCGGGAAACAAGCGTTGAAAAGATACGTGCCGATCTAG 555 0.6541 MADSSSKSKEQQSTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGAGYLSGAVVGAARGTLQGLREAESGDSLKLRLNRVLNSGGHAGRGLGNSLGVLGLIFAGLETGMIHFRGADDFVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVAGKQALKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1621 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Ssu7g1621 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 4 184 - -
Ssu7g1621 184 PANTHER TIM23 4 184 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1621 Ssu-Chr7 33872882 33873436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1621 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 56.111 1.92e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1621 K17794 - gmx:100779163 291.197