Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1613 ATGGATAGGGTGTTCTCAGTGGACGAAATCTCCGATCACTTCTGGTCGCCGCCGATCTCCGTCTCGGGTGCCGACGACTCCTCCAAGATGAGCCGCAGCGCTTCCGAGTTTGCCTTCCAGCGCTTCCTCCAGGAAGCTTCCGCACCCTCTCCCCCCTCCTCTTCCTCCGCCGCCCCCGACGTCGTCTTCGTTGAGATCGAGGATCGGCCCAAGCCCGCCCCTCCCCCTCCCAAGAACGGCGCCGTTTTGCCCAATGCCCCTGTTCCCGTGTCCCTTGACTCCGACGAATACCAGGCCTTCCTCAAGAGCCAGCTCAACCTCGCATGCGCCGCCGTCGCCATGACTAGGGGATCATTGGCTATATCTCAAGATTCATCTGCTCTTCCCGACAGTGGATTGCAGCCATCTAATCTTTCGCAAGTTGAAGCTCAGACTACTTCTAAAGGATCTACTCCTTCTGGAAATGATCCATCTAAGTTACAAGATAAAGATACCAAAGTGCCAGTTGGGATTCCTTCCATACCTACCATGCAAAAGAAACCTGCTGTTGCAATTAGGCCATCAACAAGTGGATCATCAAGAGAACAGTCTGATGACGAGGAGGCTGAGGGAGAGACATCTATGAATGACAACACGGACCCTGCTGATGCCAAACGAGTAAGGAGGATGCTATCCAATCGGGAGTCAGCCCGACGctcaagaagaagaaagcaagCTCATTTAACTGAGCTGGAAACGCAGGTTTCCCAATTAAGAGGTGAAAATTCTTCCTTGGTAAAGCGCCTTACTGATGTTAATCACAAATTCAATGAATCTGCTGTTGACAACAGAGTATTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGAATTACTGGGTTGAACCCAATGATTCATGTCATGTCTGAGATATCATCAATGGGCTTGCTATCATTTGATGGAAGAAGCCCTTCAGACACTTCAGCTGATGTAGCTGTTCCTGTGCAAGATGACTCACATCATCACTTCTATCAACCCACATCTAATAATCCTATTCCCAGTCATGATCTGAGAGTCAACAATGGGATGGGGGGCATTTCTGCAATTGAAAATGTGCAGCAGAACGCTGCTGCAGTGGTAGGTGGGAACAAGATGAGTCAAACAGCCCCCTTGCAGCGAGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTAGTGGTGTGGATCCGTGTGGACCTCCATCTAACGGGGAGCagtaa 1266 0.4921 MDRVFSVDEISDHFWSPPISVSGADDSSKMSRSASEFAFQRFLQEASAPSPPSSSSAAPDVVFVEIEDRPKPAPPPPKNGAVLPNAPVPVSLDSDEYQAFLKSQLNLACAAVAMTRGSLAISQDSSALPDSGLQPSNLSQVEAQTTSKGSTPSGNDPSKLQDKDTKVPVGIPSIPTMQKKPAVAIRPSTSGSSREQSDDEEAEGETSMNDNTDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLVKRLTDVNHKFNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMIHVMSEISSMGLLSFDGRSPSDTSADVAVPVQDDSHHHFYQPTSNNPIPSHDLRVNNGMGGISAIENVQQNAAAVVGGNKMSQTAPLQRVASLEHLQKRIRSGVDPCGPPSNGEQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1613 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Ssu7g1613 421 MobiDBLite consensus disorder prediction 69 83 - -
Ssu7g1613 421 MobiDBLite consensus disorder prediction 212 227 - -
Ssu7g1613 421 MobiDBLite consensus disorder prediction 124 158 - -
Ssu7g1613 421 SUPERFAMILY Leucine zipper domain 218 267 IPR046347 GO:0003700|GO:0006355
Ssu7g1613 421 MobiDBLite consensus disorder prediction 45 89 - -
Ssu7g1613 421 PANTHER BASIC LEUCINE ZIPPER 63 1 402 - -
Ssu7g1613 421 Coils Coil 276 296 - -
Ssu7g1613 421 Pfam bZIP transcription factor 217 267 IPR004827 GO:0003700|GO:0006355
Ssu7g1613 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 271 IPR004827 GO:0003700|GO:0006355
Ssu7g1613 421 PANTHER BZIP TRANSCRIPTION FACTOR 1 402 - -
Ssu7g1613 421 Gene3D - 217 272 - -
Ssu7g1613 421 MobiDBLite consensus disorder prediction 124 240 - -
Ssu7g1613 421 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Ssu7g1613 421 Coils Coil 227 261 - -
Ssu7g1613 421 Pfam Basic leucine-zipper C terminal 285 410 IPR020983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1613 Ssu-Chr7 33691586 33695695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1613 1 307 bZIP Transcription Factor Family AT4G02640 42.342 2.18e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu7g1613 bZIP_C 1.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1613 K25784 - gmx:778135 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1613 7 33691586 33695695 Ssu7g1613 7 33691586 33695695 ECH
Ssu4g0258 4 4219723 4226291 Ssu7g1613 7 33691586 33695695 PCT