Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1601 ATGCACACCCGCGTGTGTCTCTTGCTGGCGATTTGTTTCCCAGTTTTGTTAAACGCCGCGCCCCCCGACAAAGGTGGCGGCGGCGAGTCCTTGATGTTGGGGTGTGGGTTGGGCGAAGGTGGTGGCAAAGACAGCGACGGAAGACAATGGACCCCCGACAACAAGTACCTCTCAGGAGGCAATTCCGTGACATCCAAAGCCTCTTTTCAAGACCCTTCGCTGTTATCCGAGGTTCCATACATGACGTCACGAGTTTTCACCTCCGAAGCAACCTACAAGTTCCCCGTTCAATCCAACAAACGTTACTGGCTCAGACTCCATTTCTACCCCTCCGTCTACGGCACCTTCGACCCCTCCAACTCATATTTCTCCGTCACAGCAAACGGCGTCACGCTTCTTTCCAATTTCAGCGCCTCAGTAACATGCCAGGCCCTCTCACAAGCCTACCTCGACAGAGAGTACTCCCTCGCGCCTTTGAATTCGGACACTCTCACCGTTACCTTCAAGCCTTCCGAGAAACAAAACGGggctttttcttttgtcaacGGGATTCAGCTCATCGAAATGCCCGAGTTGTTGAGTTCGGCTCTTTTGGTGGGGTACGCTGACCAAACCATGGATGCCAAGAGTTTGCATTTTCAGACAATGTTCAGGTTAAACGTTGGTGGACAATACATTTCTCCAGCACAAGATTCTGGCCTGACAAGAATGTGGTACGATGACACACCTTATCTATATGGTGCAGCCACAGGTGTGACCAACCAAGCTGCAAAGGATGTCAAAATTGACTACAAAACCATGCCACAGTACATTGCTCCTACCGACGTGTACTCCACTTCGCGATCCATGGGCAACAATAAGGATGTCAACATGGGATTCAATCTCACGTGGGTCTTCCAAGTTGATCCAAATTCCATGTACCTTACCAGGTTTCATTTCTGTGACTATTACTATTCCAAAGTGAACGAGattgttttcaaaatcttcATCAACAACCAAACCGCGGAGACTGAAGCTGATGTGATTGGGTGGGCAGGAGGTAAAGGAGTGCCAACTTACAAGGATTTTGTAATATTTGTGAAAGATGAGCCAGGTGATGATCAACTCTGGGTTGCTTTGCACCCTACACCTGACACCAAGCCCGAATATTATGATGCAATACTCAACGGGGTTGAGGTATTCAAGCTCAATGACACAGACCTGTCTGGCCCCAATCCTCAACCTTCTGACATGCTGGTTAAACACGAGGAGAAGGCAAAGACTTTCCAGAACAAACACGACAGTGAAAAGACTTTTGTTATTGGCAGTGCTGCTGGGGGTGCTGCAGGTTTTGCCTTGGTGGCTGCAATAATTGTTGTTGTTCatcacaaaaagaagaagagagctCCGGGATCATACAGCGCATCAAGCTGGCTACCTATTTATGGGAATTCGCACACAGCAGGCACCAAATCCTCAGGGTCAGGGAAGAGTGTAGGCAGTGGCAACTTAGCCATGGCTCAAGGACTGTGCCGCTATTTCTCCTTACAGGAGATGAAGCAAGCGACCAAAAATTTCGATGAGCCCAATGTGATAGGGGTGGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATTGACAATGGGTTCAAGGTAGCAATCAAAAGATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTCCAGACTGAGATTGAGATGCTGTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGATGGTGAGATGTGTCTGGTTTATGACTACATGGCTCGTGGCACCATGAGGGAGCACCTTTACAAGGGCAACAAGCCATTGGACACTCTATCATGGAAGCAAAGGTTGGAGATCTGCATTGGAGCCGCGAGAGGCCTTCACTACCTTCACACGGGGGCAAAATACACCATCATTCATAGAGATGTCAAAACAACCAACATTCTCCTCGATGAAAACTGGGTTGCCAAGGTTTCAGATTTTGGATTGTCTAAAACAGGTCCAAACATGAACAATGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACTTGGATCCTGAGTATTTCAGGAGGCAACAGTTGACCGAGAAGTCTGATGTGTACTCATTTGGGGTTGTCCTCTTTGAGGCCCTTTGTGCGAGGCCTGCTCTCAATCCTAGTCTTCCAAAGGAACAGGTAAGCCTTGCGGAATGGGCATTGTACAACAAAAGAAACGGAACACTTGAGGACATCATTGACCCCAATATCAAAGGACAGATCAACCCTGAAAGCTTGAACAAGTTTGCTGACGCGGCTGAGAAGTGTGTGTCTGATCTTGGATTTGATCGCCCCTCCATGAATGATCTGTTGTGGAATCTCGAATTTGCTCTCAGCTTGGAACAAAACCCCGATGGTTCAACTCACGCTCCACCTCTTGACGAAGGTGAGTTTGAAGAAGTAAGCTTAGAAAACAATGACATGGCAGCTCACTACAAAAACCTTAGCCTTGGAAGTGAGCATGAGCTTAGCCACGAGCCCAGTAGTGAGAACTCTGCTGCCATCTTCTCACAAATTGCCAATCCAAAAGGACGATGA 2589 0.4708 MHTRVCLLLAICFPVLLNAAPPDKGGGGESLMLGCGLGEGGGKDSDGRQWTPDNKYLSGGNSVTSKASFQDPSLLSEVPYMTSRVFTSEATYKFPVQSNKRYWLRLHFYPSVYGTFDPSNSYFSVTANGVTLLSNFSASVTCQALSQAYLDREYSLAPLNSDTLTVTFKPSEKQNGAFSFVNGIQLIEMPELLSSALLVGYADQTMDAKSLHFQTMFRLNVGGQYISPAQDSGLTRMWYDDTPYLYGAATGVTNQAAKDVKIDYKTMPQYIAPTDVYSTSRSMGNNKDVNMGFNLTWVFQVDPNSMYLTRFHFCDYYYSKVNEIVFKIFINNQTAETEADVIGWAGGKGVPTYKDFVIFVKDEPGDDQLWVALHPTPDTKPEYYDAILNGVEVFKLNDTDLSGPNPQPSDMLVKHEEKAKTFQNKHDSEKTFVIGSAAGGAAGFALVAAIIVVVHHKKKKRAPGSYSASSWLPIYGNSHTAGTKSSGSGKSVGSGNLAMAQGLCRYFSLQEMKQATKNFDEPNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDGEMCLVYDYMARGTMREHLYKGNKPLDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLAEWALYNKRNGTLEDIIDPNIKGQINPESLNKFADAAEKCVSDLGFDRPSMNDLLWNLEFALSLEQNPDGSTHAPPLDEGEFEEVSLENNDMAAHYKNLSLGSEHELSHEPSSENSAAIFSQIANPKGR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1601 862 Pfam Malectin-like domain 34 395 IPR024788 -
Ssu7g1601 862 Gene3D - 211 397 - -
Ssu7g1601 862 Gene3D - 33 190 - -
Ssu7g1601 862 SUPERFAMILY Protein kinase-like (PK-like) 498 793 IPR011009 -
Ssu7g1601 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Ssu7g1601 862 Gene3D Transferase(Phosphotransferase) domain 1 595 805 - -
Ssu7g1601 862 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 28 847 - -
Ssu7g1601 862 Gene3D Phosphorylase Kinase; domain 1 482 594 - -
Ssu7g1601 862 MobiDBLite consensus disorder prediction 835 862 - -
Ssu7g1601 862 PANTHER OS07G0166700 PROTEIN 28 847 IPR045272 GO:0004714|GO:0006468
Ssu7g1601 862 ProSiteProfiles Protein kinase domain profile. 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1601 862 SMART serkin_6 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1601 862 Pfam Protein tyrosine and serine/threonine kinase 524 733 IPR001245 GO:0004672|GO:0006468
Ssu7g1601 862 CDD STKc_IRAK 525 792 - -
Ssu7g1601 862 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1601 Ssu-Chr7 33538191 33540779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1601 29 862 Receptor kinase-like Gene Family AT3G51550 52.644 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu7g1601 Malectin_like 8.4e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1601 - - gmx:100791236 1495.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0250 4 4064378 4066972 Ssu7g1601 7 33538191 33540779 PCT