Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1593 ATGGGGACTCCAGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGACCCAGAGGTATCTTGGATTGATGGACAGGTATTAAAAATCAATGGAAAGGATGCTGAAATTGAAACTACCAATGGAAAAAAGGTTGTcgcaaatttatcaaaaatatatccTAAGGATATGGAAGCTCCTCCTGGTGGAGTGGACGATATGACTAAACTGTCCTATTTGCACGAGCCTGGAGTCCTGCAGAACTTAAAAGCTAGATATGAAttgaatgaaatatatACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGTGCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGCCCTCATGTATTTGCTGTTGCTGATGTTGCATATAGgGCAATGATTAATGAAGGAAAAAGCAATTCAATTTTAGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAATACCTTGCTTTCTTAGGTGGTAGGGCTGGTACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGGAATGCTAAAACTGTCAGGAATAACAATTCTAGTCGttttggtaaatttgttgagatCCAATTTGATAAAAGTGGAAGAATATCAGGAGCAGCCATCCGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAAATTAATGATCCTGAAAGGAACTACCATTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCTAGATCATTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGATGTAAGTGACGCTCGTGAATATCTTGCCACCCGGAGAGCTATGGATATTGTTGGAATAAGTCAAAAAGATCAGGAAGCCATTTTCAGAGTTGTTGCTTCAATTCTTCATATTGGTAATATTGATTTTGCCAAAGGAAAGGAAATTGATTCATCAGTTCCAAAAGATGACAAAGCGAAATTCCACCTGAAAACAACTGCTGAGCTTCTCATGTGCGATGCTGATGCCTTGGAAGACGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGACCCCCAAAGTGCATTAGTCAGTAGAGATGGACTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAACAATTCAATTGGACAAGACCCCAAATCTAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTCGAGCAATTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAAGTCTAGAACAAATTACATACTTCAACACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTAGACCTTATTGAGAagAAACCTGGAGGAATCATTGCTCTCCTAGATGAAGCTtgCATGTTTCCAAAGTCAACTCATGAAACATTTGCAAACAAGCTTTATCAAACATTTAAGAATCACAAGCGCTTTATTAAGCCAAAATTGTCTAGAACGGATTTCACAATTGCTCATTATGCTGGGGAGGTATTATACCAGTCTGACCAATTCTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTGCTTCTAAATGTCCTTTTGTATCTGGCCTTTTTCCACCACTTCCAGAAGAGACATCAAAATCTtccaaattttcttcaattggtTCTCGTTTTAAGCTACAACTACAACAACTAATGGAGACATTAAATTCTACAGAACCCCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTCGAGAATATCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTGGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACGCGCCGTGctttctttgaatttataaacAGATTTGGCCTCCTTGCCCCAGAGGCCATGGAAGCAAACTGTGATGAAAAGACTGGTTGCCAAAAGATTCTGGAAAAGATGGGGCTTAAAGGATATCAgATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGCACAGAGAGCTCAACTACTTAGTAATGCAGCAAAAGTTATCCAACGGCGCATACGAACTCATCAAGCTCGTAAACATTATCTTGCATTGCGAAAGAAGACCATATATGTGCAGTCTCGGTGGAGAGGAAGACTTGCATGCAAACTCTATGAGCACTTAAGAAGGGAGGCTGCTGCTGTGAAAATTCAAAAGAGCGTACGCAGATATGAAGCTAGGAAAGCCTATAAAGAACTTCATGTGTCAGTACTTATACTGCAAACAGCTTTAAGGGCCGTTGCTGCTCGCAAGGAATTCAGATTTAGGAAGCAGACTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCCTTATATTATAATAGGCTCAAGAAAGGTACAATAGTTACACAATGCAGATGGAGGGGACGCGTAGCCAGGAAAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGTGCCCTTCAAGAAGCAAAGGATAAACTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAGGTTTAAGGACCAATCTAGAAGAATCCAAAGTGCAGGAGATAGCAAAACTGCAGAATTCATTGCAGGAGATGCAGAGCAAAGTTGATGAAACTAATGCTCTGCTCATCAAAGAGCGAGAGAATGCAAAGAAAGCTGTTGAAGAAGCACCTCCAGTTATTAAAGAAACACAGGTTATTGTTGAAGATACACAGAAGATTGAGACACTGACAGCAGAAGTTGAGAGCCTAAAGACTTCACTTGAGTCAGAGAAACAGAAAGGTGatgactttgaaaaaaaatacaatgaagCCCAAGTTTGTAGTgaagaaagagggaaaaaacTAGAAGACACAGAGAAGAAGGCTCGTCAGCTTCAAGAATCATTGACTAGGCTAGAAGAGAAGATTACTAATTTAGAATCAGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGCTCAAGATCAATTGTCCAGAGAACTGAAAGTGGTCATATTGTGGCGGAAGCAAAGACATCTCTGTCTAATCAGGAAATGCATAGCACATCAATGCACCGGAGAGAACCCTCTGATGGCTTGGACGATAAACCACAAAAGTCACTAAATGAGAAACAACAGGAGAATCAAGAGTTACTCATTAGATGTATTGCACAACATCTAGGCTTTGCTGGGAACAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACTAGCGTTTTTGATCGAATCATCCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTCCAGCGCACGCTCAAGGCTAGTGGTGCTGCTGGAATGGCTCCGCAACGCCGTCGTTCTTCATCAGCAACCCTGTTTGGGAGGATGACTCAAaGTTTCCGTGGAACTCCAACTGGAGTCAATCTTTCCCTAATCAATGGTAGCACAAGCAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTAGAAAAGATATATGGAATGATTCGTGATAATTTGAAGAAAGAAATTTCTCCCTTGCTCGGATTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCTTGGTTAAGGGATCATCACGTTCTGTTGCAAACACTGAAGCCCAGCGCGCTTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTGGGAAACTTTCTAAATACTTTGAAAGCAAATCATGTTCCTCCATTTTTAGTTCGTAAGGTGTTcacacaaattttttctttcatcaatgTACAATTATTCAATAGtCTTCTTTTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACAGATGAGtaTGCGGGTTCAGCCTGGGATGAGCTCAAACATATTAGACAAGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACATTGGATGAAATAAGCCATGACCTGTGCCCAGTCCTTAGTATACAGCAGCTATATCGGATAAGCACCATGTACTGGGATGACAAATATGGAACGCATAGTGTGTCCTCTGATGTCATATCCAATATGAGAGTATTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACATATCGAAATCAATGGAACAGATAGATATCTCAGATATAGAGCCCCCGCCACTAATTCGTGAAAACTCTGGCTTTAGCTTTTTGTTGCCGCGCCCAGATTGA 4632 0.3923 MGTPVNIIVGSHVWIEDPEVSWIDGQVLKINGKDAEIETTNGKKVVANLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSKCYELADVSDAREYLATRRAMDIVGISQKDQEAIFRVVASILHIGNIDFAKGKEIDSSVPKDDKAKFHLKTTAELLMCDADALEDALCKRVMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINNSIGQDPKSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQAKSRTNYILQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVSGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENINIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGLLAPEAMEANCDEKTGCQKILEKMGLKGYQIGKTKVFLRAGQMAELDAQRAQLLSNAAKVIQRRIRTHQARKHYLALRKKTIYVQSRWRGRLACKLYEHLRREAAAVKIQKSVRRYEARKAYKELHVSVLILQTALRAVAARKEFRFRKQTKASIIIQARWRCHKAALYYNRLKKGTIVTQCRWRGRVARKELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNLEESKVQEIAKLQNSLQEMQSKVDETNALLIKERENAKKAVEEAPPVIKETQVIVEDTQKIETLTAEVESLKTSLESEKQKGDDFEKKYNEAQVCSEERGKKLEDTEKKARQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIVQRTESGHIVAEAKTSLSNQEMHSTSMHRREPSDGLDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPTGVNLSLINGSTSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRPD 1543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1593 1543 ProSiteProfiles IQ motif profile. 816 845 IPR000048 GO:0005515
Ssu7g1593 1543 Gene3D Kinesin motor domain 65 672 IPR036961 -
Ssu7g1593 1543 CDD MYSc_Myo11 76 730 IPR036018 -
Ssu7g1593 1543 ProSiteProfiles IQ motif profile. 864 893 IPR000048 GO:0005515
Ssu7g1593 1543 Coils Coil 978 1005 - -
Ssu7g1593 1543 Coils Coil 1027 1061 - -
Ssu7g1593 1543 Coils Coil 887 914 - -
Ssu7g1593 1543 Gene3D - 439 633 - -
Ssu7g1593 1543 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 Coils Coil 926 960 - -
Ssu7g1593 1543 Gene3D - 252 310 - -
Ssu7g1593 1543 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 Pfam Myosin head (motor domain) 64 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 PRINTS Myosin heavy chain signature 492 520 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 795 IPR027417 -
Ssu7g1593 1543 MobiDBLite consensus disorder prediction 1092 1125 - -
Ssu7g1593 1543 ProSiteProfiles Myosin motor domain profile. 62 742 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 SMART MYSc_2a 57 743 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g1593 1543 PANTHER MYOSIN 6 1540 - -
Ssu7g1593 1543 Pfam IQ calmodulin-binding motif 842 861 IPR000048 GO:0005515
Ssu7g1593 1543 Pfam IQ calmodulin-binding motif 747 765 IPR000048 GO:0005515
Ssu7g1593 1543 Pfam IQ calmodulin-binding motif 866 885 IPR000048 GO:0005515
Ssu7g1593 1543 Pfam IQ calmodulin-binding motif 795 814 IPR000048 GO:0005515
Ssu7g1593 1543 ProSiteProfiles IQ motif profile. 793 820 IPR000048 GO:0005515
Ssu7g1593 1543 SMART iq_5 767 789 IPR000048 GO:0005515
Ssu7g1593 1543 SMART iq_5 744 766 IPR000048 GO:0005515
Ssu7g1593 1543 SMART iq_5 840 862 IPR000048 GO:0005515
Ssu7g1593 1543 SMART iq_5 863 885 IPR000048 GO:0005515
Ssu7g1593 1543 SMART iq_5 792 814 IPR000048 GO:0005515
Ssu7g1593 1543 SMART iq_5 815 837 IPR000048 GO:0005515
Ssu7g1593 1543 SMART DIL_2 1361 1468 IPR002710 -
Ssu7g1593 1543 CDD MyosinXI_CBD 1124 1509 IPR037975 GO:0007015
Ssu7g1593 1543 PANTHER MYOSIN-9 6 1540 - -
Ssu7g1593 1543 Gene3D Myosin VI head, motor domain, U50 subdomain 312 611 - -
Ssu7g1593 1543 ProSiteProfiles IQ motif profile. 745 772 IPR000048 GO:0005515
Ssu7g1593 1543 MobiDBLite consensus disorder prediction 1102 1124 - -
Ssu7g1593 1543 Gene3D - 843 892 - -
Ssu7g1593 1543 Gene3D - 795 842 - -
Ssu7g1593 1543 Gene3D - 744 794 - -
Ssu7g1593 1543 ProSiteProfiles IQ motif profile. 768 797 IPR000048 GO:0005515
Ssu7g1593 1543 Gene3D - 677 740 - -
Ssu7g1593 1543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 795 893 IPR027417 -
Ssu7g1593 1543 Pfam DIL domain 1362 1465 IPR002710 -
Ssu7g1593 1543 ProSiteProfiles Dilute domain profile. 1173 1486 IPR002710 -
Ssu7g1593 1543 Coils Coil 734 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1593 Ssu-Chr7 33417274 33432396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1593 1 1543 Myosins gene family AT1G54560 83.484 0.0 2707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1593 K10357 - gmx:100816792 2907.09