Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1586 ATGCAAACCCACCTGCTGTTCTTCTATTGTTACATTGGCCTCACACTTGTTTTTGCTGAGACTGCAGCAGATGATCAATTGTCAGCTCTGCTCTCAATCAAATCCACTCTCATTGACCCAATGAGGCATCTGAAGGATTGGCAACTACCAAGCAATGTGACACAGCCAGGTTCACCCCATTGTAACTGGACTGGAGTTGGTTGCAACTCTAAAGGCTTTGTAGAGAGTCTTGACCTCTCCAACATGAACCTTAGCGGTTCTGTTTCGGACAGCATTCAATCTCTTTCAAGTCTATCTTCTTTCAACATAAGCTGTAACAACTTTGCTTCATCACTGCCCAAATCATTGTCCAACCTCACCTCTCTCAAGAGCTTTGATGTGAGCCAGAATTCCTTCACTGGCAGCTTTCCCACTGGTCTTGGAAGAGCTGCAGGCTTGAGATCAATAAATGCATCGAGCAATGATTTTTCGGGTTTTCTTCCTGAGGATATTGGAAATGCTACCTTGCTTGAGAGCCTCGATTTTCGAGGGAGTTACTTTGTGAGTTCAATCCCCAGGAGTTTCAAGAATCTGCAGAAGCTCAAGTTTCTAGGCCTTTCAGGCAATAACTTCACTGGGAGGATTCCAGGTTATCTTGGGGAACTCACTTCTCTGGAGACATTGATTATAGGATACAACGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTGACCAGTCTCCAATACCTTGACTTGGCTGTAGGAAGTCTCAGTGGACAAATTCCAGCGGAATTGGGTAAGTTGACAAAACTCACCACAATTTATTTGTACCATAACAAATTCACAGGAAAAATTCCACCTCAACTTGGCAACATTACTTCATTAGCATTTTTGGACCTCTCTGACAATCAGATCTCAGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGAAGCTCTTAAATCTGATGAGCAACAAGCTAACTGGTCCTGTACCGGAGAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTACAAGGCCCTTTGCCACACAACCTTGGACAGAACTCTCCTTTGCAGTGGTTGGATGTATCCTCTAACTCATTATCCGGGGAGATCCCTCCAGGTTTGTGTACTACTGGCAATCTCACCAAACTAATCCTCTTCAACAATTCCTTCACTGGTTCCATTCCAAGTGGACTTGCAAACTGCTTCTCTTTGGTACGTGTTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGCTTTGGAAACCCCCTTGGCCTTCAACGGCTGGAGTTGGCAAAGAACAACCTCACTGGGAAAATTCCTACTGATATTACCTCATCCACATCACTCTCTTTCATTGATGTATCTTGGAATCACCTTGAGTCATCTCTACCATCAGATATTCTTTCTATTCCTACCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAAATATCCCAGATGAGTTCCAGGACTGTCCATCTCTTTCTGTGCTGGATCTTTCAAACACCCAGATATCTGGCACAATCCCTGAAAGTATTGCTTCTTGTCAAAAATTAGTCAACCTTAACCTTCGAAATAACCACTTGACAGGTGGAATCCCGAAATCAATCACGAACATGCCCACCTTATCTGTTCTTGATCTGTCCAACAATTCATTGACTGGTAGGATACCTGAAAACTTTGGCAGCTCCCCAGCTCTGGAAATGCTGAACCTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGTTGATGACCATAAATCCTAATGATCTTATCGGCAATGCGGGTCTTTGCGGAGGCATTCTCCCTCCATGTTCTTCAAGTTTGACTGTGACAAGCCATCGAAGTAGCTCACATATCAGACACATCATCATTGGTTTTGTGTCTGGCATTTCAGTGATTTTAGCTCTTGGTGCAGTATATTTTGGTGGTAGATGTTTATACAAGAGATGGAACTTGTATAACAATTTCATCCATGATTGGTTCAAACAGAGCAATGAAGATTGGCCCTGGAGGTTAGTAGCATTCCAGAGGATCAATTTCACTAGTAGTGACATCCTTACTTGCATAATGGAATCAAATGTCATAGGCATGGGTGGCACTGGTATTGTTTACAAAGCTGAAATCCATAGACCTCACGTAACCGCAGCAGTGAAGAAACTATGGAGGTCACAGACAGACATAGAAAATGGCAATGATGTGTTAAGAGAAGTGGAACTCCTAGGGAGACTTAGGCACAGGAATATTGTAAGGCTGTTGGGGTATGTACACAATGAAAAGGATGTGATGATGATTTACGAGTACATGCCTAACGGGAATCTTGGAACGGCACTGCATGGTGAACAATCTGCAAGGTTGCTTGTTGACTGGGTCTCAAGGTACAACATAGCTCTTGGAGTTGCACAAGGGCTTAACTACCTCCACCATGATTGTCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTAGAGGCAAGAATAGCAGATTTTGGGTTGGCAAGGATGATGATTCAGAAGAATGAGACAGTTTCCATGGTGGCCGGATCATACGGATATATCGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTACGGAGTGGTGCTTTTGGAGCTCCTAACTGGCAAAATGCCTTTAGACCCTGTATTTGAAGAATCAATTGACATAGTCGAATGgataaggaagaagaaaaacaacaaagCCTTGTTAGAAGCACTAGATCCTGCTATAGCTAGTCAGTGCAAACATGTCCAAGAAGAAATGCTGCTCGTACTCCGGATTGCACTTCTATGTACCGCAAAGCTTCCCAAGGAAAGACCACCTATGAGAGACATCATCACAATGCTCGGAGAGGCAAAGCCAAGAAGAAAAAGCGTTTGCCATAATGGGGGACAAGACAGCAGTAGCATGGAAAAGCCAACGATCTTTACCACCTCCCCAGTGGTAAATCTTTTGTAG 3048 0.4301 MQTHLLFFYCYIGLTLVFAETAADDQLSALLSIKSTLIDPMRHLKDWQLPSNVTQPGSPHCNWTGVGCNSKGFVESLDLSNMNLSGSVSDSIQSLSSLSSFNISCNNFASSLPKSLSNLTSLKSFDVSQNSFTGSFPTGLGRAAGLRSINASSNDFSGFLPEDIGNATLLESLDFRGSYFVSSIPRSFKNLQKLKFLGLSGNNFTGRIPGYLGELTSLETLIIGYNEFEGEIPAEFGNLTSLQYLDLAVGSLSGQIPAELGKLTKLTTIYLYHNKFTGKIPPQLGNITSLAFLDLSDNQISGEIPEELAKLENLKLLNLMSNKLTGPVPEKLGELKNLQVLELWKNSLQGPLPHNLGQNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFTGSIPSGLANCFSLVRVRIQNNLISGTIPVGFGNPLGLQRLELAKNNLTGKIPTDITSSTSLSFIDVSWNHLESSLPSDILSIPTLQTFIASHNNFGGNIPDEFQDCPSLSVLDLSNTQISGTIPESIASCQKLVNLNLRNNHLTGGIPKSITNMPTLSVLDLSNNSLTGRIPENFGSSPALEMLNLSYNKLEGPVPSNGMLMTINPNDLIGNAGLCGGILPPCSSSLTVTSHRSSSHIRHIIIGFVSGISVILALGAVYFGGRCLYKRWNLYNNFIHDWFKQSNEDWPWRLVAFQRINFTSSDILTCIMESNVIGMGGTGIVYKAEIHRPHVTAAVKKLWRSQTDIENGNDVLREVELLGRLRHRNIVRLLGYVHNEKDVMMIYEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPVFEESIDIVEWIRKKKNNKALLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPPMRDIITMLGEAKPRRKSVCHNGGQDSSSMEKPTIFTTSPVVNLL 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1586 1015 SUPERFAMILY Protein kinase-like (PK-like) 701 979 IPR011009 -
Ssu7g1586 1015 Gene3D Ribonuclease Inhibitor 311 624 IPR032675 -
Ssu7g1586 1015 Pfam Leucine rich repeat N-terminal domain 23 69 IPR013210 -
Ssu7g1586 1015 ProSiteProfiles Protein kinase domain profile. 705 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1586 1015 SUPERFAMILY RNI-like 252 597 - -
Ssu7g1586 1015 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 8 996 - -
Ssu7g1586 1015 SUPERFAMILY L domain-like 47 348 - -
Ssu7g1586 1015 PRINTS Leucine-rich repeat signature 290 303 - -
Ssu7g1586 1015 PRINTS Leucine-rich repeat signature 551 564 - -
Ssu7g1586 1015 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Ssu7g1586 1015 Gene3D Ribonuclease Inhibitor 182 251 IPR032675 -
Ssu7g1586 1015 SMART LRR_typ_2 335 359 IPR003591 -
Ssu7g1586 1015 SMART LRR_typ_2 287 311 IPR003591 -
Ssu7g1586 1015 SMART LRR_typ_2 191 215 IPR003591 -
Ssu7g1586 1015 SMART LRR_typ_2 551 575 IPR003591 -
Ssu7g1586 1015 SMART LRR_typ_2 119 143 IPR003591 -
Ssu7g1586 1015 SMART LRR_typ_2 95 118 IPR003591 -
Ssu7g1586 1015 SMART LRR_typ_2 263 286 IPR003591 -
Ssu7g1586 1015 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Ssu7g1586 1015 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Ssu7g1586 1015 Pfam Protein kinase domain 708 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1586 1015 Gene3D Phosphorylase Kinase; domain 1 705 787 - -
Ssu7g1586 1015 SMART serkin_6 705 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1586 1015 Gene3D Ribonuclease Inhibitor 252 310 IPR032675 -
Ssu7g1586 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Ssu7g1586 1015 Pfam Leucine Rich repeat 288 304 IPR001611 GO:0005515
Ssu7g1586 1015 PANTHER UNNAMED PRODUCT 8 996 - -
Ssu7g1586 1015 Gene3D Transferase(Phosphotransferase) domain 1 788 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1586 Ssu-Chr7 33295968 33299488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1586 4 1015 Receptor kinase-like Gene Family AT1G08590 64.666 0.0 1308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ssu7g1586 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1586 - - gmx:100793873 1818.9