Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1554 ATGAGTTGCGAAGGCGAAGAAGCAGAAGCACAATACTTCTGCAAGGACTTCGACTGGGAAGACCTAAGAGCAGAGGTGGAAGCAAACCCCTGCTTTCGCTACCACTTTGAATCTGCTTCTTCATCGTCGTTACCGCCACCGGAATCAGACGTCCAAGCGTGGAAGCAATTTCACCTCCGTCACGCCTCTGGAAAATTTTTCAAGGAGAGACGCTATTTGTTAAAGGAGTTCCCAGAACTACTCTGTCTCCCAAACTCTAAGCTCTTGGAAGTTGGTTGTGGCAATGGCAGCACCGCCCTTCCTATTCTACGGGCCAACAAAGATGTGATTGTTTATGCATGCGACTGTAGTGATGAGACTCTTGAGAGGGCTAAAGAGATTGTAAGTGGTGCCACCACAGTCGCATCCTTTGAGCATCGTTTCCGTATATTCTGTTGTGATATTTCCACTAATGGATTCCCAAACTGGTTGGCATGCAACCCTTGCCGAGATAAATTTCTACAAAGGCAGTCATACTGTTTGTCAGATGTCAGAGAGGATAATGGACTGCATTTTACCAATCCGTATCCATCGGAAGAATTTGACTGTTGTGTTGGCGGAGTAGATTTTGTAACATTGATATTCACTCTATCAGCAGTACCACTGGAAAGGATGCCAAAGTCTGTCGAGGAATGTTTTATTGTGTTAAAGCCAGGAGGCATGGTTTTTTTTAGGGACTACGGCCTCTATGATATGACCATGCTTCGATTTGAGCCAGACAAGCGAGTGGGATTCAGGGAATACATGCGGTCAGATGGAACACGatcatatttcttttgtttggatACTGTGCGGAACCTATTTTTGGGTGCAGGCTTCACTGAGCTTGAGCTTGACTATTGTTGTGTTAAGTCTGTAAATCGCCAGAAAGGGAAGTGCATGCAAAGAGTGTGGGTTCACGGGAAGTTCCAGAAGCCGCCTGCACTGAGTTGTCAATAA 978 0.4519 MSCEGEEAEAQYFCKDFDWEDLRAEVEANPCFRYHFESASSSSLPPPESDVQAWKQFHLRHASGKFFKERRYLLKEFPELLCLPNSKLLEVGCGNGSTALPILRANKDVIVYACDCSDETLERAKEIVSGATTVASFEHRFRIFCCDISTNGFPNWLACNPCRDKFLQRQSYCLSDVREDNGLHFTNPYPSEEFDCCVGGVDFVTLIFTLSAVPLERMPKSVEECFIVLKPGGMVFFRDYGLYDMTMLRFEPDKRVGFREYMRSDGTRSYFFCLDTVRNLFLGAGFTELELDYCCVKSVNRQKGKCMQRVWVHGKFQKPPALSCQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1554 325 CDD AdoMet_MTases 87 237 - -
Ssu7g1554 325 PANTHER METHYLTRANSFERASE-RELATED 6 319 IPR026113 -
Ssu7g1554 325 PANTHER O-METHYLTRANSFERASE 3 6 319 - -
Ssu7g1554 325 PIRSF Mettl2 5 322 IPR026113 -
Ssu7g1554 325 Pfam Methyltransferase domain 70 289 - -
Ssu7g1554 325 Gene3D Vaccinia Virus protein VP39 51 310 IPR029063 -
Ssu7g1554 325 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 53 319 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1554 K00599 - gmx:100795629 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0200 4 3332228 3335823 Ssu7g1554 7 32670622 32673773 ECH
Ssu7g1554 7 32670622 32673773 Ssu7g1554 7 32670622 32673773 ECH