Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1528 ATGTTGAAATTCTTGAAAGAGGTGGTGGGTGGATCTGGCACGGGCCTCAAAGATCTCCCATACAACATCGGTGAACCTTACCCTTCTGCCTGGGGCTCTTGGCTTCATTTTCGCGGCACCTCCAAGGATGATGGTTCTCCGGTGTCAATATTTTCTGTATCTGGTAGCAATGCTCAGGATGGACATTTAGCTGCGGCTCGTAATGGCGTTAAGCGTCTTCGCACTGTTAGGCATCCGAATATTTTGTCATTTCTTCACAGCACCGAGATCGAAACCGTTGACGCTGGTTCTCCCAAGGTTACAATTTATATGGTGACCGAGCCCGTGGTGCCGCTGTCAGACAAGATTAAGGAGTTAGGTCTTGAAGGTACACAAAGGGATGAATATTATGCTTGGGGCCTGCATCAAGTAGCAAAAGCTGTGAGCTTCTTAAATAACGATTGTAAACTTGTTCATGGTAATGTTTGCTTGGCTAGTGTTGTCGTCACACAAACTTTGGATTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGTAATGAAACTTCCTCGGGGCAAATGCTGCAATATGAATGGCTTGTTGGATCACAATACAAACCAATGGAACTGGCAAAATCTGACTGGGCTGCAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGgTTGTTTAATCTATGAGCTATTCTCTGGTATGAAGTTGAGCAAAACAGAGGAGTTACGCAACACTGTTTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTGAGTTCCATGCCAGCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGagtattttcaaaataagttggTAGACACAATACATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAGAAAGACACCTTCTTCCGCAAGCTTCCAAATTTGGCAGAGCAGCTTCCTCAGCAGATTGTGTTGAAAAAGTTACTTCCTTTATTAGCTTCTGCACTTGAATTTGGTTCAGCTTCTGCCCCCGCTTTGACTGcattgttgaaaatgggttccTGGCTTTCTGCTGAGGAGTTCCGTGTCAAGgtgCTTCCAACAATTGTTAAACTTTTTGCGTCCAATGACCGAGCTATTCGGGTTGGCCTTCTTCAACATTTTGATCAATATGGGGAGTCATTATCAGCACAAGTTGTTGACGAGCAGGTTTATCCTCATGTTGCTACTGGGTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGCTAATTCTGGCTCCGAAGCTGTCTCAAAGGACCATTTCAGGGTCATTATTAAAGCATATGTCAAGGTTACAGGTTGACGAAGAACCAGCTATTCGAACAAATACTACAATCTTATTGGGAAATATTGCTAGCTGCTTAAATGATGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCGGgcATTATGGCTTTATGTGCCACCAGTTCCTACTATGACATCACTGAAATTGCAACTCGGATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTGTTGATCAATTTTTGCAAATGGTGAAGCAATATTATGAAAAGACAAATACAGCAGAGGCTAATGAGGGTACAGGCATGGGAATCTCGTCAATTCCAGGAAATGCTGGTTTACTTGGATGGGCTATGAGCTCCTTGACTCTGAAGGGTAAACCTTCTGATCATGCTCCAGTTGCTTTTGTGAGTTCTAGTGCAGTTACTCCAACATCTTCTAATTCCAGCTCAGCTGTAGATACTCCTTCAACGGCACCTGTTCGCGTAAGCTCCACAACAGATTTTGCTGAACACCCTGTCCCAACATCCCCAACATCAACAGATGGCTGGGGGGAGCTAGAGAATGGACTCGATGAGGAGCGTGAAAATGACAAGGATGGGTGGGATGATCTGGAACCACTTGAAGAAATAAAGCCAACTCCAGCTCTAGCGAACATTCAAGCAGCTCAAAGGCGGCCAGTTTCTCAACCTGTTTCGCAGACAAAACAAGccTCAAGTTTGCGACCCAAAAGTACACCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTTCCATAGCAGCTCCTGCTCCAAAAACATCAAAAccttcaaatttgaaatcaacTGTAACAGATGATGATGATCCTTGGGCTGCCATTGCTGCTCCTGCACCCACCACTAAGGCCAAGCCCTTATCAGCTGGCAGAGCGCGGGGTGCTAAACCTGCTGCTCCAAAGTTAGGTGCTCAGCGGATAAACCGGACAACATCATCCGGGATGTAA 2391 0.4329 MLKFLKEVVGGSGTGLKDLPYNIGEPYPSAWGSWLHFRGTSKDDGSPVSIFSVSGSNAQDGHLAAARNGVKRLRTVRHPNILSFLHSTEIETVDAGSPKVTIYMVTEPVVPLSDKIKELGLEGTQRDEYYAWGLHQVAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSGQMLQYEWLVGSQYKPMELAKSDWAAIKKSPPWAIDSWGMGCLIYELFSGMKLSKTEELRNTVSIPKSLLPDYQRLLSSMPARRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPQQIVLKKLLPLLASALEFGSASAPALTALLKMGSWLSAEEFRVKVLPTIVKLFASNDRAIRVGLLQHFDQYGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTISGSLLKHMSRLQVDEEPAIRTNTTILLGNIASCLNDGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQMVKQYYEKTNTAEANEGTGMGISSIPGNAGLLGWAMSSLTLKGKPSDHAPVAFVSSSAVTPTSSNSSSAVDTPSTAPVRVSSTTDFAEHPVPTSPTSTDGWGELENGLDEERENDKDGWDDLEPLEEIKPTPALANIQAAQRRPVSQPVSQTKQASSLRPKSTPKLSKDEDDDLWGSIAAPAPKTSKPSNLKSTVTDDDDPWAAIAAPAPTTKAKPLSAGRARGAKPAAPKLGAQRINRTTSSGM 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1528 796 SUPERFAMILY ARM repeat 293 554 IPR016024 -
Ssu7g1528 796 PANTHER - 1 793 - -
Ssu7g1528 796 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Ssu7g1528 796 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 793 - -
Ssu7g1528 796 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1528 796 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Ssu7g1528 796 ProSiteProfiles Protein kinase domain profile. 3 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1528 796 Gene3D - 282 562 IPR011989 -
Ssu7g1528 796 MobiDBLite consensus disorder prediction 689 796 - -
Ssu7g1528 796 MobiDBLite consensus disorder prediction 691 713 - -
Ssu7g1528 796 MobiDBLite consensus disorder prediction 609 674 - -
Ssu7g1528 796 MobiDBLite consensus disorder prediction 656 674 - -
Ssu7g1528 796 MobiDBLite consensus disorder prediction 609 652 - -
Ssu7g1528 796 ProSiteProfiles HEAT repeat profile. 523 561 IPR021133 -
Ssu7g1528 796 Pfam Protein kinase domain 38 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1528 796 Gene3D Transferase(Phosphotransferase) domain 1 109 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1528 Ssu-Chr7 32183699 32195229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1528 70 291 MAP Kinase Kinase Kinase AT5G66850 25.738 1.38e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Ssu7g1528 Pkinase 2.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1528 K08876 - gmx:100792884 1369.37