Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1521 ATGGGGGAAGTGGTGATGAAGGAAGAAGACGAAGTTGTGGTTGCTCCAACTAACTTTTCAATGGTTGAGGAGGGCATTTATCGCTCCAGCTTCCCTCGATCTTCAAATTTCTCCTTTATCGAAACTCTCAATCTTCGATCCATCATATATTTGTGTCCCGAACCCTATCCACAACAAAATTTAGAGTTTCTTCGATCGCACAATATTCGGCTCTTTCACTTTGGTGTTGAAGGCAAGACGGATCTTACTGTCTCTGCTGTCAGGGATACTATCTTGGAGGCTGTCAAAGTTTTAATTGATGTGAGAAATCACCCAGTTTTAATCCACTGCAATCAAGGAAAGCATCGAACTGGTTGCGTTGTTGGTTGCTTGAGAAAATTGCAGAATTGGTGTTTATCTTCTGTGTTTGAGGAGTACAAGCGATTTGCTGGTGCTAAATCCAGGACAACAGATTTAAGGTTCATAGAAACGTTTAATGTATTAAGCCTGAGGCAGTGTCTTAACAGCATCATATACCAGTACCTAGGATATGCTTCAAAGAAGCTGCGGTTGCTATATAGAGATGAGAATTCACTGAGGCTCCAGTTGACATCAGTTTAG 600 0.415 MGEVVMKEEDEVVVAPTNFSMVEEGIYRSSFPRSSNFSFIETLNLRSIIYLCPEPYPQQNLEFLRSHNIRLFHFGVEGKTDLTVSAVRDTILEAVKVLIDVRNHPVLIHCNQGKHRTGCVVGCLRKLQNWCLSSVFEEYKRFAGAKSRTTDLRFIETFNVLSLRQCLNSIIYQYLGYASKKLRLLYRDENSLRLQLTSV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1521 199 PRINTS Plant and fungal dual specificity phosphatase signature 13 30 IPR020428 GO:0016791
Ssu7g1521 199 PRINTS Plant and fungal dual specificity phosphatase signature 69 83 IPR020428 GO:0016791
Ssu7g1521 199 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Ssu7g1521 199 PRINTS Plant and fungal dual specificity phosphatase signature 50 63 IPR020428 GO:0016791
Ssu7g1521 199 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 7 182 - -
Ssu7g1521 199 CDD PFA-DSP_Siw14 13 159 - -
Ssu7g1521 199 Pfam Tyrosine phosphatase family 13 162 IPR004861 -
Ssu7g1521 199 Gene3D Protein tyrosine phosphatase superfamily 13 162 IPR029021 -
Ssu7g1521 199 ProSitePatterns Tyrosine specific protein phosphatases active site. 108 118 IPR016130 GO:0016311|GO:0016791
Ssu7g1521 199 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 158 IPR029021 -
Ssu7g1521 199 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 89 121 IPR000387 GO:0016311|GO:0016791
Ssu7g1521 199 PANTHER TYROSINE-PROTEIN PHOSPHATASE 7 182 - -
Ssu7g1521 199 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 173 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1521 Ssu-Chr7 32115204 32116894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1521 4 190 Protein tyrosine phosphatase (PTP) family AT3G02800 63.684 1.49e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1521 K18045 - gmx:100808199 350.132