Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1505 ATGGATTCGGATTCGGATTCTGGATCCACAAACAGCATCATTGTTTCGGATTCTGGATCCATAAACAGCATCATGGTTTGGGATTTGGATTCTGGATCCGCAAACAGCAGCGCAGTTTCGGGCATGGATCCTGAATCCATAATCAACGGCACGGTTTCGGATTTGGATCCTGGATCCATAACAAACACCACGGTTTCTGATTTGGATCCTGGATCCATAACAAACACCAGCACATTTTCGGATTTGGATCCTGGATCCGTAACCAACAGCACGTTTTCGGATCTGGACTGGGGATCCGTAGGCGGCGTGTCGGATATATGCCAGCTCGATCCAGACCCAAATACCATATACAACACAGCACAACCCCGAAATTCTCCTTCATTTTCACCTTCCCCTTCCCCTTCCCCTTCGCTATCTCTGTCTCTGTCTCCTGCTTCCTCTTCTACTGAGAGCGGAGATTCTCCTCCTCGTCTCATCTACCCCACTCCCAACCAATTGCAATACCCTCACCGCCTCAGGTCGTTCCCCATTTCCGTGCCCTCAATTACCGCGCGCCACGCGAGGATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCGGACCCGCCGGACGAGTGGGTGGACGGGTCCTGGACGGTGGACTGCATCTGCGGCGTGACGTTCGACGACGGCGAGGAGATGGTGAAATGCGACGAGTGCGGCGTGTGGGTCCACACGCGCTGCTCGCGCTACGTCAAGGGCGACGACACCTTCGCCTGCGACAAGTGCAAGGCCAGGCACAGCAGCAACAACACCGAGGAGACCGAGGTCGCGCAGTTCCTCGTCGAACTCCCCACCAAAACCATCTCCATGGACAACAAAATGGCCCTCCCCTCCCGGCCCAGGCTCTGGACCGATAAGCCCATGGCGGAGCGGGTCCACGTTCACGGCCCACCCGGCGGCGACCCTTCCATCTTCGCCGCCAGCAGTGCCTCCTCGATTTTCACCCCGCAGCTCTGGAAGGCCTGCGGGTATGTTCCCAAGAAGTTTAACTTTCAGTATCAGGAGTTTCCTTTCTGGGGCGATAATAACGATAACGAGGGTGCACAAGCACAAGCGCAACCACAAGACGCCAATACTGCTGGGGCTCTTGTTTCTTCGTCTAAAGACGCTGACACTGCTGCTCCTGTCTTGGACGCCCCTGTTGAGGCTTTGGCTGATGCGAGATCTAGCCACGGCAAGGACAAGTACGCGGACACGGGCAAGTTTGGGAGCGAGGATATGCCGCCACGTGTCGACAGTGATATGAAGAAGGAGAGGACTCTGCTGAGGCCTCCTGTTGTTCATAACAGTAAGCGCAGGAAGGAGGATTCCGTGGCTTTGAATTCCAAGGACCGGAGCGGGAAGAAGCGGGTTAGGTCTTCTGAGAAAGAGGTGGATCCCAGGAGGAGAACGCAGCAGTCTTCTAAAACAGTGTTTACACCTGCCAATGATGGAAAACAACTGGACTTTTATGAGGACAGAGGTCCAAAGATTTTCAAGGCTGACACTCGGAgcataaagaataaaaacttgaaagacATAGTGGTTCAAGAACATGTTTCTGATGATTATTTAGCTGTGGATGCCATCACGGAGGAGCCAAATAACAACATAACAACTACCGACGACTCTTCAGAACCATTATATCCTGACATGACTAGACATGGTGTTTCTGTTGGAGATGCAGTTGCAGAAGATAAGACTAGCCTTAAAGCTCCTACTTTGGTTGAGATGTCTTCTAAGACTGATGATGCTGTTACATCGGCTTTAAAGCAGAATTATGTTGGAAATGCTTCAGTTAAAGAAAAGGATGGAGATTGCTTGGTAGCTGGTAATGCAGATGATACTTTAGTAGTAAAAAGAGCTGCAAGTACTCACACAGAAGGTCATGGTGGTTCTGCGCCAGAACTTATGGATAACCAAGTTTCTCAAGATCTTGACCGTAACATGCGTCCTGGCTCTGCAAAATGCAAAGTTAAGATGAAGAGAGATGACGATGTTGATAATTTTAGGAAGCCCtcaaattttcattcttctCCTATCAGTGAtcttaaaaacaatgaaaaaccATCTGATCACACatttgatattgttaaagtGAATGATGCTCCAGTTCCCAGTGTACCATCATGTGAAAATAAGGTGGGTGGTGTTGACCTTTCATCAGAGGTAATCCCTACTGATCATACCAATAAACCCAATGAATTATCTGGTGATTCTTGTCATAGAAAACAGGAACTGGAGGGATCTGAAGGTTCCTTGGAAACACAAAAGGGATTTTCTGAAACAAAAGATGATTCAGATGCTGCTAAAGATCCATCAAAATCTGAAGCACTTGGATGTCTACCTAAAGTGCTAGCATGTGTTGGAAAGTCATCTCCAACTTCGTCAACCATGAATTCCAAATCATTGGATCACGACTTCAAATCTGAAGATACTGAAATCCCTAGTTCTTTTACGAAGCATGGAGTGATGGCTGATTGTAACATTCACATAAAGAATGAAATTTGTCCAAGTAATGCTGCTAGGGATGAAAATCCAAAGAAATCTGTGAGAGAGCGACCAAAACCCTCTTTGAATTCCAATTCAAAAGGATTGCATTCAAGCAGGAGTGTGCAAAATTCTGTCTCAAAGCAAGGGAATTCAGATGCGAGAGATTCTGTTCATGtttcgtcttctaaatcttcgATACATCAGACTGCAAATATCTTAGGCTCTGGTGAGTCTAATGCATCATTGCACCATCAGAAGGTTTTACAAGTGCAGAATAAGATTCCATCTTCAGCGCCACAGAAAGTTGAAAAGCTTAACCAAACAAACATCCACACTTCCTCAAAGTTGACCCAAAGTCATGTGTCATCTGTGAATCCTTCTCCAATATCAAATTCTTCAATGCTGAGTGATGAGGAGCTTGCTCTGCTATTGCATCAAGAACTGAATAGTTCGCCTCGTGTACCTCGTGTACCCCGAGCACGCCATGCTGGTAGCTTGCCACAGCTAACTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGAACATCGGGTGGAGGAAAGGACCATTATTTGGTATCTAGACGAAAACACAAGGATGCATCTAGAGATGGGTCTGGCAGTTCACGTGAACTTGAAGATGAAGCTAAAGGGATAGAGAAGGAGAAGGGTCCATCCTCCTCTGATCAGAGGAAAcaagatatgtcatatgtggAAGATGCTCCTGCAAGGGAAGATGGCCTTGCATCTATGACAGCCGCAAACTCCATCACTAACAATACTGTTTCTTCCACCTCTGCAATTGCAAACAGTGATCCATCCTCCCCTCCTGAGGATCAGAATTTGTCATCTATGCGTAACTCACCCAGGAATATATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGATATTATGAGCAAAGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCATTGGCATAACTTGAGGAAGCATAATGGAGAGCGTTATGCATACTCAAGTCACTCTCAAGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGGAAAAGGCGTAAGCTGGATGCTGAAGAATCTGATGATAATGGATATGGCAAGGCAAGAACTGCGAAAGAGGTTGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTTCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTTGCTCTTCAGGGAAGAGCAGTGACGGATGTCAGGAGGAGACAAAAAGCTGACTCGCTAACGGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGTTGGCAGAATATGTCCCGCAGGAAGTGCATCAGATGAGGCAGGTAGTGCCTAA 3975 0.4631 MDSDSDSGSTNSIIVSDSGSINSIMVWDLDSGSANSSAVSGMDPESIINGTVSDLDPGSITNTTVSDLDPGSITNTSTFSDLDPGSVTNSTFSDLDWGSVGGVSDICQLDPDPNTIYNTAQPRNSPSFSPSPSPSPSLSLSLSPASSSTESGDSPPRLIYPTPNQLQYPHRLRSFPISVPSITARHARMKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHSSNNTEETEVAQFLVELPTKTISMDNKMALPSRPRLWTDKPMAERVHVHGPPGGDPSIFAASSASSIFTPQLWKACGYVPKKFNFQYQEFPFWGDNNDNEGAQAQAQPQDANTAGALVSSSKDADTAAPVLDAPVEALADARSSHGKDKYADTGKFGSEDMPPRVDSDMKKERTLLRPPVVHNSKRRKEDSVALNSKDRSGKKRVRSSEKEVDPRRRTQQSSKTVFTPANDGKQLDFYEDRGPKIFKADTRSIKNKNLKDIVVQEHVSDDYLAVDAITEEPNNNITTTDDSSEPLYPDMTRHGVSVGDAVAEDKTSLKAPTLVEMSSKTDDAVTSALKQNYVGNASVKEKDGDCLVAGNADDTLVVKRAASTHTEGHGGSAPELMDNQVSQDLDRNMRPGSAKCKVKMKRDDDVDNFRKPSNFHSSPISDLKNNEKPSDHTFDIVKVNDAPVPSVPSCENKVGGVDLSSEVIPTDHTNKPNELSGDSCHRKQELEGSEGSLETQKGFSETKDDSDAAKDPSKSEALGCLPKVLACVGKSSPTSSTMNSKSLDHDFKSEDTEIPSSFTKHGVMADCNIHIKNEICPSNAARDENPKKSVRERPKPSLNSNSKGLHSSRSVQNSVSKQGNSDARDSVHVSSSKSSIHQTANILGSGESNASLHHQKVLQVQNKIPSSAPQKVEKLNQTNIHTSSKLTQSHVSSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTSGGGKDHYLVSRRKHKDASRDGSGSSRELEDEAKGIEKEKGPSSSDQRKQDMSYVEDAPAREDGLASMTAANSITNNTVSSTSAIANSDPSSPPEDQNLSSMRNSPRNISDDDTATAGRPVHRTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNSNRKRRKLDAEESDDNGYGKARTAKEVEGKNFELQKEEFPKGKRKARKRRRLALQGRAVTDVRRRQKADSLTDEDVGPFSNSSEESMFSEDEIQVGRICPAGSASDEAGSA 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 990 1078 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 185 206 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 729 783 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1288 1302 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1025 1078 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1101 1132 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 863 970 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 48 85 - -
Ssu7g1505 1324 ProSitePatterns Zinc finger PHD-type signature. 215 256 IPR019786 -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 134 165 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1004 1018 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1101 1142 - -
Ssu7g1505 1324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 264 IPR013083 -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 400 498 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 798 822 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 111 165 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 111 126 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 658 679 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 401 478 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 765 780 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 542 561 - -
Ssu7g1505 1324 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 189 1319 - -
Ssu7g1505 1324 PANTHER UNCHARACTERIZED 189 1319 - -
Ssu7g1505 1324 SUPERFAMILY FYVE/PHD zinc finger 203 260 IPR011011 -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 354 380 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1207 1237 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1251 1303 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 630 701 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 742 758 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 1267 1285 - -
Ssu7g1505 1324 SMART PHD_3 214 257 IPR001965 -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 841 970 - -
Ssu7g1505 1324 MobiDBLite consensus disorder prediction 354 381 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1505 213 256 PHD Transcription Factor Family AT5G22260 44.681 2.72e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1505 - - gmx:100799209 1867.43