Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1499 ATGGGAAGCGGAAGCGGAAGCAGAAGCTACTCGGTGAATCCGAGCGATTACACGCTTCTAGAAGAAGTCGGTTACGGCGCGAGCGCCACGGTGTACCGCGCAATCTACCTCCCTTACAACGAGGAGGTGGCGGTTAAGTGTCTGGATCTGGATCGATGCAACAGCAATTTTGACGACATACGGAGGGAGGCGCAGACGATGAGCCTGATCGAGCACCCGAACGTGGTGAGGGCGTATTGCTCGTTCGTGGTGGAGCAGAGCCTTTGGGTGGTGATGGGATTCATGGCGCAGGGCTCCTGCCTGCATCTCATGAAGGCCGCGTATCCCGAGGGATTCGAAGAGGCCGCCATCGGATCTATCCTGAAGGAGACTCTCAAGGCGCTCGAGTACCTCCACCGGCACGGCCACATTCACCGCGACGTTAAGGCCGGGAATATTCTGCTAGATTCCAACGGACAGGTCAAGCTCGCCGACTTCGGCGTCTCCGCTTGCATGTTCGACGCCGGCGACCGCCAGCGTTCCAGAAACACCTTCGTCGGAACTCCCTGCTGGATGGCGCCGGAGGTGCTGCAACCTGGAACCGGTTATAATTTCAAGGCGGATATTTGGTCTTTTGGAATTACGGCGTTGGAGTTGGCTCATGGTCACGCGCCTTTCTCCAAATATCCTCCCATGAAGGTTCTTCTGATGACTATTCAGAATGCCCCTCCGGGGCTTGATTACGATCGTGACCGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCATCTGTGGAGAAGTTGCTCAAACACTCCTTCTTCAAACAAGCTAAGCCTCCAGAGCTTTCTGTAAAGAAATTATTTGCTGATTTACCACCTCTGTCGAACCGTGTAAAATCCCTCCAGCTTAAAGATGCAGCTCAACTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCTAAGTGAATATCAGCGAGGAGTTAGTGCGTGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGATGCAGGACGATGATGATATTGCAGATATGGGGGAAGAAGGTGAAAACAAATTCTTCAGCTCTTACAAGGATCCAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCTAATAACTTGCAACAAGATGTGGTCACATTACAAGTAGGTAGTAACTACATACCACAGAGTGAGAAGAGAAATGGATCAGTTGCTGAAGCAACATCATCTACTTTAGAGAAGGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCGCTGATGCCAGGCTCAGTGCTTGGTCATTCTTTATCTGAAAGAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCAGTTATCAGGTGAGAAAAGTAATCGTGATATACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAGTTTAGTACAAATTAAAGGACGATTCTCAGTGACGTCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTCAGTTCAGTTTCACGCCGTACTTCACAGGGATCGCCAATCAGGAAATCTGCCAGTGTTGGTGATTGGATGGTGGATTACAAACAAATGCCAATCGGTCAGTCCTCCCATGATTCTACCAATATCAATATTCCTGCATCACTTCTAGTGCCTCATCTTCACAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAAACTGCCGAGGCAATTGATGCTTCTCAGAATGGAAAGTTGCCACCGTTACCTCGTAATTCAGAGAACAATGGAAGTGTTGATACAGCAGTCTCAGAGAAGGAACATCTGCTGCTGGCCAAAATTTCAGAACTCCAATCTCGGATGATTAATTTGACCGATGAACTGACTTATGAGAAGTTAAGATATGTGCAGTTGCAACAACAACTAGCTGCTCTCTACAGCCAGGAACAAAATGGGGAAAGAGAGGAATTTGCGTGA 2121 0.4635 MGSGSGSRSYSVNPSDYTLLEEVGYGASATVYRAIYLPYNEEVAVKCLDLDRCNSNFDDIRREAQTMSLIEHPNVVRAYCSFVVEQSLWVVMGFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGQVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFKQAKPPELSVKKLFADLPPLSNRVKSLQLKDAAQLALKKMPSAEQEAISLSEYQRGVSAWNFDIDDLKAQASLMQDDDDIADMGEEGENKFFSSYKDPTDSQFIVDKKNSNNLQQDVVTLQVGSNYIPQSEKRNGSVAEATSSTLEKDVGTSKVKTQSVKLGKTQSGPLMPGSVLGHSLSERGRAFERFENENQLSGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKASLVQIKGRFSVTSENLDLVKDIPVSSVSRRTSQGSPIRKSASVGDWMVDYKQMPIGQSSHDSTNINIPASLLVPHLHNLFQQTSIQQDLIMNLLNSLQTAEAIDASQNGKLPPLPRNSENNGSVDTAVSEKEHLLLAKISELQSRMINLTDELTYEKLRYVQLQQQLAALYSQEQNGEREEFA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1499 706 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 6 699 - -
Ssu7g1499 706 MobiDBLite consensus disorder prediction 408 451 - -
Ssu7g1499 706 ProSiteProfiles Protein kinase domain profile. 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1499 706 Gene3D Phosphorylase Kinase; domain 1 6 93 - -
Ssu7g1499 706 CDD STKc_OSR1_SPAK 15 278 - -
Ssu7g1499 706 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 699 - -
Ssu7g1499 706 SUPERFAMILY Protein kinase-like (PK-like) 14 329 IPR011009 -
Ssu7g1499 706 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Ssu7g1499 706 Gene3D Transferase(Phosphotransferase) domain 1 98 326 - -
Ssu7g1499 706 Pfam Protein kinase domain 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1499 706 MobiDBLite consensus disorder prediction 408 442 - -
Ssu7g1499 706 SMART serkin_6 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1499 706 Coils Coil 683 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1499 Ssu-Chr7 31658476 31669386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1499 10 698 MAP Kinase Kinase Kinase Kinase AT4G10730 64.865 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Ssu7g1499 Pkinase 1.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1499 - - gmx:100783699 1280