Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1498 ATGGCCAATCTTTTGAGTCATAACAGAATGTTGGTGTCTCTCTTGCTTACGTTGTTCCAAATCCAAGACAAGGTACTTTGCTACCAATACAAAGTTGGAGATCTAGATGCTTGGGGGATACCCACCTCAGCAAATCCACAAGTCTACACGAAATGGTCCAAATATCACAATCTCACAATTGGAGACTCGCTTTTGTTTTTGTACCCACCAAGTCAAGATTCGGTGATTCAAGTTACAGAGGAATCCTTCAAGAGGTGCAACCTAAAAGACCCGATATTGTATATGAACAATGGCAACTCTTTGTTTAACATTACATCAAAAGGGCAATTCTACTTCACTAGTGGTGTGGCTGGCCAGtgccaaaaaaatcaaaagcttCATATAGCAGTGGGTGAAGGGATGGAAAATATTGATGCAGCACCAGGTCCAAGTTCTTCATTGCCTGCATATGCACCCTCCTATCCCACAGTATTTGGCAACATTCCAGTATCTCCTTCTACCTCAACCTCACCTCACTTCACTTCCACTTTTCAACTCCTCATCATTGGATTTGTGATATCTGCGCTCTTCTCTGCCTTAATGTAA 585 0.4103 MANLLSHNRMLVSLLLTLFQIQDKVLCYQYKVGDLDAWGIPTSANPQVYTKWSKYHNLTIGDSLLFLYPPSQDSVIQVTEESFKRCNLKDPILYMNNGNSLFNITSKGQFYFTSGVAGQCQKNQKLHIAVGEGMENIDAAPGPSSSLPAYAPSYPTVFGNIPVSPSTSTSPHFTSTFQLLIIGFVISALFSALM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1498 194 CDD OsENODL1_like 28 130 IPR041846 -
Ssu7g1498 194 PANTHER BLUE COPPER PROTEIN 5 190 IPR039391 GO:0009055
Ssu7g1498 194 PANTHER MAVICYANIN 5 190 - -
Ssu7g1498 194 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Ssu7g1498 194 Gene3D - 28 141 IPR008972 -
Ssu7g1498 194 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Ssu7g1498 194 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1498 Ssu-Chr7 31653499 31654222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1498 10 163 Phytocyanin Superfamily AT1G64640 55.844 1.15e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1498 - - gmx:100527517 313.538